TABLE II:
Summary of models. Note that the first and second parts of the name (first only for randomer models) indicates cell type and disease state, the next part indicates the feature set used, and the last number (along with the other information) uniquely identifies that model.
| Name | Repertoire Type | Disease State | Feature Set | Test/Train | Converged |
|---|---|---|---|---|---|
| Random 1–1 | randomers | - | 1 | train | yes |
| Random 1–2 | randomers | - | 1 | train | yes |
| Random 1–3 | randomers | - | 1 | test | yes |
| TRB b.l. 1–2 | TRB | baseline | 1 | train | yes |
| TRB b.l. 1–1 | TRB | baseline | 1 | train | yes |
| TRB b.l. 1–3 | TRB | baseline | 1 | test | yes |
| TRB b.l. 1–4 | TRB | baseline | 1 | test | yes |
| TRB infex 1–3 | TRB | infected | 1 | train | yes |
| TRB infex 1–1 | TRB | infected | 1 | train | yes |
| TRB infex 1–2 | TRB | infected | 1 | test | yes |
| TRB can. 1–1 | TRB | cancer | 1 | train | yes |
| TRB can. 1–2 | TRB | cancer | 1 | test | yes |
| TRB b.l. 2–1 | TRB | baseline | 2 | train | yes |
| TRB b.l. 2–2 | TRB | baseline | 2 | test | yes |
| TRB infex 2–3 | TRB | infected | 2 | train | yes |
| TRB infex 2–1 | TRB | infected | 2 | train | yes |
| TRB infex 2–2 | TRB | infected | 2 | test | yes |
| IGH b.l. 1–1 | IGH | baseline | 1 | train | yes |
| IGH b.l. 1–4 | IGH | baseline | 1 | train | yes |
| IGH b.l. 1–2 | IGH | baseline | 1 | test | yes |
| IGH b.l. 1–3 | IGH | baseline | 1 | test | yes |
| IGH vax 1–2 | IGH | vaccinated | 1 | train | yes |
| IGH vax 1–1 | IGH | vaccinated | 1 | test | yes |
| IGH b.l. 2–1 | IGH | baseline | 2 | train | yes |
| IGH b.l. 2–2 | IGH | baseline | 2 | test | yes |
| IGH vax 2–1 | IGH | vaccinated | 2 | train | yes |
| IGH vax 2–2 | IGH | vaccinated | 2 | test | yes |
| IGH can. 1–1 | IGH | cancer | 1 | train | no |
| IGH can. 1–2 | IGH | cancer | 1 | test | no |