Table 3.
In silico 18S V4 taxonomic resolution of host-associated protozoa and helminths
| Count | Percent | ||||||
|---|---|---|---|---|---|---|---|
| Total unique sequences | 1 species | >1 species | >1 genus | 1 species | >1 species | >1 genus | |
| Blastocystis | 141 | 139 | 2 | 0 | 0.986 | 0.014 | 0.000 |
| Ciliophora | 772 | 770 | 2 | 0 | 0.997 | 0.003 | 0.000 |
| Apicomplexa | 1476 | 1458 | 17 | 1 | 0.988 | 0.012 | 0.001 |
| Amoebazoa | 317 | 316 | 1 | 0 | 0.997 | 0.003 | 0.000 |
| Acanthocephala | 72 | 69 | 3 | 0 | 0.958 | 0.042 | 0.000 |
| Platyhelminthes | 531 | 517 | 6 | 8 | 0.974 | 0.011 | 0.015 |
| Nematoda | 460 | 435 | 21 | 4 | 0.946 | 0.046 | 0.009 |
Third and sixth columns represent species-level resolution.
See Supplementary Table 2 for full list of unresolved species.