ACN	acetonitrile
AGC	automatic gain control
ALT	alanine transaminase
AST	aspartate aminotransferase
BCAAs	branched chain amion acids
BP	biological Process
CC	Cellular Component
COG	clusters of orthologous groups
CYP450	cytochrome P450
DEPs	differentially expressed proteins
ELISA	enzyme-linked immunosorbent assay
FA	formic acid
FC	fold change
FMO	flavin-containing monooxygenase
FMT	fecal microbiota transplantation
FTH1	ferritin heavy chain 1
GABA	γ-aminobutyric acid
Glu	glutamate
GMP	guanosine monophosphate
GO	gene ontology
GPX4	glutathione peroxidase 4
GSH	glutathione
HCD	higher-energy collisional dissociation
HE	hepatic encephalopathy
HRMS	high-resolution mass spectrometry
KEGG	Kyoto Encyclopedia of Genes and Genomes
LC-MS	Liquid chromatography–Mass spectrometry
LOLA	L-ornithine-L-aspartate
MDA	malondialdehyde
MeOH	Methanol
MF	Molecular Function
NAFLD	nonalcoholic fatty liver disease
NCOA4	nuclear receptor coactivator 4
PBS	phosphate-buffered saline
PCA	principal component analysis
PLS-DA	partial least squares discrimination analysis
PSMs	peptide spectrum matches
PUFA	polyunsaturated fatty acid
QC	quality control
ROS	reactive oxygen species
SEM	standard error of mean
SPF	specific pathogen-free
STEAP3	six-transmembrane epithelial antigen of prostate 3
TAA	thioacetamide
TMT	tandem mass tags
UMP	uridine monophosphate
VIP	variable importance in projection