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. 2024 Jan 11;6(1):zcad062. doi: 10.1093/narcan/zcad062

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© The Author(s) 2024. Published by Oxford University Press on behalf of NAR Cancer.

This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 1. — Overview of data processing and availability in CLEAN. Overview of default data processing in CLEAN (left). Pie chart showing the different experimental perturbations that are currently implemented in CLEAN with precise number of studies indicated between parentheses (top-mid). CLEAN screenshot of the default RNA-Seq tab, indicating the 3 main components: (1) the sidebar takes user input and updates what's in the main panel; (2) a searchable table with detailed differential gene expression or related information and (3) an interactive plot (bottom-right). External data sources that are directly (left) or indirectly (via hyperlinks) (top-right), integrated in CLEAN.