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. 2024 Jan 2;25(1):bbad492. doi: 10.1093/bib/bbad492

Table 1.

Details on confusion matrix and performance measurement metrics of three machine-learning models with different window sizes

Window size 50 k 20 k 10 k 5 k
Performance metrics SVM RF DL SVM RF DL SVM RF DL SVM RF DL
Accuracy 80.43% 81.10% 80.54% 81.88% 73.83% 87.14% 84.12% 72.60% 88.14% 81.99% 75.62% 85.35%
Precision 79.67% 84.92% 82.16% 79.66% 76.92% 88.50% 82.97% 77.26% 84.07% 81.73% 78.47% 80.01%
Recall 79.11% 72.55% 76.05% 80.84% 58.23% 86.81% 78.35% 54.04% 93.04% 78.35% 57.49% 92.81%
F1 79.39% 78.25% 78.99% 80.24% 66.28% 87.65% 80.01% 63.59% 88.33% 80.01% 66.36% 85.93%
AUC 90.07% 90.62% 91.64% 91.00% 83.51% 95.03% 94.29% 82.62% 96.49% 91.24% 84.71% 94.58%
Acc std on cross val. 0.019 0.007 0.026 0.010 0.012 0.031 0.019 0.007 0.022 0.047 0.018 0.099
Prediction Correlation 0.762 0.704 0.725 0.730 0.601 0.802 0.787 0.580 0.825 0.736 0.603 0.777
P-value 1.10E−153 1.88E−121 5.80E−114 1.54E−120 1.59E−93 2.71E−188 9.28E−138 4.89E−89 1.35E−216 1.03E−124 6.81E−98 6.95E−176

DL: our Deep Learning model.