KEY RESOURCES TABLE
| Resource Type | Specific Reagent or Resource | Source or Reference | Identifiers | Additional Information |
|---|---|---|---|---|
| Add additional rows as needed for each resource type | Include species and sex when applicable. | Include name of manufacturer, company, repository, individual, or research lab. Include PMID or DOI for references; use “this paper” if new. | Include catalog numbers, stock numbers, database IDs or accession numbers, and/or RRIDs. RRIDs are highly encouraged; search for RRIDs at https://scicrunch.org/resources. | Include any additional information or notes if necessary. |
| Software; Algorithm | Plink v1.9 | https://doi.org/10.1186/s13742-015-0047-8 | RRID:SCR_001757 | |
| Software; Algorithm | EIGENSOFT | https://doi.org/10.1038/ng1847 https://doi.org/10.1371/journal.pgen.0020190 | RRID:SCR_004965 | |
| Software; Algorithm | LDSC | https://doi.org/10.1101/002931 | NA | |
| Software; Algorithm | matplotlib Python package | https://doi.org/10.5281/zenodo.592536 | RRID:SCR_008624 | |
| Software; Algorithm | region-plot Python package | https://doi.org/10.5281/zenodo.4095310 | NA | |
| Software; Algorithm | METASOFT | https://doi.org/10.1016/j.ajhg.2011.04.014 | NA | |
| Software; Algorithm | PRSice-2 | https://doi.org/10.1093/gigascience/giz082 | RRID:SCR_017057 | |
| Software; Algorithm | FUMA | https://doi.org/10.1038/s41467-017-01261-5 | RRID:SCR_017521 | |
| Software; Algorithm | PRScs | https://doi.org/10.1038/s41467-019-09718-5 | NA | |
| Software; Algorithm | TeraPCA | https://doi.org/10.1093/bioinformatics/btz157 | NA | |
| Software; Algorithm | PHESANT | https://doi.org/10.1093/ije/dyx204 | NA | |
| Software; Algorithm | 3D Genome Browser | https://doi.org/10.1186/s13059-018-1519-9 | NA |