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. 2023 Dec 8;27(1):108643. doi: 10.1016/j.isci.2023.108643
REAGENT or RESOURCE SOURCE IDENTIFIER
Biological samples

RNAlater™ Stabilization Solution Fischer Scientific Cat# AM7020
OMNIgeneGUT DNAgenotek Cat# OMR-200
Vacutainer® EDTA Tubes BD Cat# 366643
Vacutainer® SST™ Tubes BD Cat# 367988
Lactate Plus Meter Test Strips Nova Biomedical Cat# 40813

Critical commercial assays

Complete Blood Count (including Differential and Platelets) Quest Diagnostics Test Code 6399
Comprehensive Metabolic Panel Quest Diagnostics Test Code 10231
DNeasy PowerSoil Pro Kit Qiagen Cat# 47014
Quant-iT™ PicoGreen™ dsDNA Assay Kits and dsDNA Reagents Thermo Fisher Cat# P7589

Software and algorithms

OWUS-4.3 Windows O2 Uptake Software Parvo Medics https://www.parvo.com/trueone-2400/
Automated Self-Administered Dietary Assessment Tool (ASA24) NIH https://asa24.nci.nih.gov/
MetaPhlAn2 PMID: 26418763 https://github.com/biobakery/MetaPhlAn2
HUMAn2 PMID: 30377376 https://github.com/biobakery/humann
MetaKey ProDigests https://prodigest.eu/metakey/
Xcalibur Software v4.0.27.21 Thermo Fisher https://www.thermofisher.com/us/en/home/industrial/mass-spectrometry/liquid-chromatography-mass-spectrometry-lc-ms/lc-ms-software/lc-ms-data-acquisition-software/xcalibur-data-acquisition-interpretation-software.html
SIMCA® v17 Sartorius https://sartorius.com/en/products/process-analytical-technology/data-analytics-software/mvda-software/simca
QIIME2 https://qiime2.org RRID:SCR_021258
SPSS v27 IBM https://www.ibm.com/spss?lnk=flatitem
GraphPad Prism Dotamatics https://www.graphpad.com/features

Other

Informed consent was obtained from all subjects involved in the study. The study was conducted in accordance with the Declaration of Helsinki, and approved by the Institutional Review Board of Lindenwood University. Lindenwood University & Declaration of Helsinki Protocol #22–60, approval date: 1/4/22.
Woodway Desmo-Evo Treadmill Woodway https://www.woodway.com/home-page/
Polar H10 Polar USA https://www.polar.com/us-en/sensors/h10-heart-rate-sensor
TrueOne 2400 Metabolic Cart Parvo Medics https://www.parvo.com/trueone-2400/
InBody 570 InBody https://inbodyusa.com/products/inbody570/
Lactate Plus Meter Nova Biomedical 62624
NovaSeq 6000 Illumina 6000
Vanquish Quaternary Pumping System Thermo Fisher VF-P20-A
Q-Exactive™ Quadrupole-Orbitrap High-Resolution Mass Spectrometer Thermo Fisher IQLAAEGAAPFALGMBDK
Fecal metagenomic sequence data Sequence Read Archive (SRA) https://www.ncbi.nlm.nih.gov/sra/ PRJNA103161