Table 1.
Genomic position | Sequence | Amplicon length (bp) | |
---|---|---|---|
eccDNA SORBS1circle | chr10:97206791–97208025 | F: ATTTACACTGGGCCATGAGG | 142 |
R: AGTGATTCTCCTGCCTCTGC | |||
eccDNA DGKIcircle | chr7:137407136–137407412 | F: TTTGTCATTGCCACCTCAAC | 134 |
R: GTAATGCTGGCTCGCAGTTT | |||
eccDNA COG2circle | chr1:230789246–230789354 | F: AATTCTACTAGCCAGAGTGTTTAGA | 51 |
R: TCTGGCTGGGCACAGTGG | |||
eccDNA FAM20Ccircle |
chr7:217309–217415 | F: CAGACTGGCTGTGGGTGAG | 75 |
R: AGGAGCCAGGGATGATGAC | |||
eccDNA ETV1circle |
chr7:14009902–14010102 | F: AACTTGGGCGAGAAGGTATG | 131 |
R: GTTGCTGCTTTGTGTGTGTG | |||
pGEX-5X-2 | F: GGGCTGGCAAGCCACGTTTGGTG | 176 | |
R: CCGGGAGCTGCATGTGTCAGAGG |
F Forward, R Reverse, DGKI diacylglycerol kinase iota, COG2 conserved oligomeric Golgi complex subunit 2, FAM20C family with sequence similarity 20- member C, ETV1 ETS variant 1