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. 2024 Jan 12;29:12. doi: 10.1186/s11658-023-00530-0

Table 1.

Sequences of outward facing primers

Genomic position Sequence Amplicon length (bp)
eccDNA SORBS1circle chr10:97206791–97208025 F: ATTTACACTGGGCCATGAGG 142
R: AGTGATTCTCCTGCCTCTGC
eccDNA DGKIcircle chr7:137407136–137407412 F: TTTGTCATTGCCACCTCAAC 134
R: GTAATGCTGGCTCGCAGTTT
eccDNA COG2circle chr1:230789246–230789354 F: AATTCTACTAGCCAGAGTGTTTAGA 51
R: TCTGGCTGGGCACAGTGG

eccDNA

FAM20Ccircle

chr7:217309–217415 F: CAGACTGGCTGTGGGTGAG 75
R: AGGAGCCAGGGATGATGAC

eccDNA

ETV1circle

chr7:14009902–14010102 F: AACTTGGGCGAGAAGGTATG 131
R: GTTGCTGCTTTGTGTGTGTG
pGEX-5X-2 F: GGGCTGGCAAGCCACGTTTGGTG 176
R: CCGGGAGCTGCATGTGTCAGAGG

F Forward, R Reverse, DGKI diacylglycerol kinase iota, COG2 conserved oligomeric Golgi complex subunit 2, FAM20C family with sequence similarity 20- member C, ETV1 ETS variant 1