Figure 5: Summary of results from -canonical sampling for the and NTL912–23 systems.
(a) Surface plot showing the per-residue alpha helicity, calculated using the DSSP algorithm 157, for each of the eight residues in as a function of pH. (b) Ensemble-averaged radius of gyration (blue curve) as a function of pH and standard deviations of the pH-dependent distributions for radii of gyration (pink envelope) for system. (c) Mean net charge (blue curve) as a function of pH and standard deviation for the pH-dependent net charge distributions for the system. Panels (d), (e), and (f) are results for the NTL912–23 system and are equivalent to panels (a), (b), and (c).