Figure 2.

The overview of haplotype-resolved chromosome-level genome of sika deer

A. Length (Mb) of the chromosome. B. Density of LTR transposons. C. Density of LINE transposons. D. Density of DNA transposons. E. Density of SINE transposons. F. Gene number. G. GC content (the windows of 1 Mb). H.Ka/Ks of syntenic gene pairs in Hap1. I.Ka/Ks of syntenic gene pairs in Hap2. J. Links between the core connected alleles. LTR, long terminal repeat; LINE, long interspersed nuclear element; SINE, short interspersed nuclear element; Ka, nonsynonymous mutation; Ks, synonymous mutation.