Table 1:
Genome assembly and contig statistics
|
Ascosphaera Species |
acerosa | aggregata | pollenicola | atra | apis |
|---|---|---|---|---|---|
| Accession Numbers | JAGYHY000000000 | JAGYHZ000000000 | JAGYIB000000000 | JAGYIA000000000 | GCA_001636715.1 |
| Depth of Coverage | 97.8X | 60.1X | 99X | 57.9X | - |
| Scaffold count | 5020 | 4503 | 5538 | 12891 | 82 |
| Total Length | 18611625 | 19806921 | 19988041 | 29072572 | 20313079 |
| Min | 500 | 500 | 500 | 996 | 1075 |
| Max length (bp) | 38,273 | 41,254 | 31,524 | 19,378 | 159,2427 |
| Median contig length (bp) | 2089 | 2780 | 2153 | 1741 | 129110 |
| Mean contig length (bp) | 3707.5 | 4398.61 | 3609.25 | 2255.26 | 247720.48 |
| L50 | 822 | 797 | 925 | 3523 | 13 |
| L90 | 3123 | 2735 | 3265 | 10268 | 37 |
| N50 | 6542 | 7511 | 6319 | 2504 | 482601 |
| N90 | 1529 | 2048 | 1624 | 1228 | 168129 |
| GC content | 61.64% | 47.12% | 50.22% | 51.41% | 47.66% |
| Heterozygosity | 0.41% | 0.19% | 0.18% | 3.17% | - |
| Repeat content | 8.01% | 5.59% | 3.55% | 9.26% | - |
| BUSCO Completeness Score | 44.6% | 59.4% | 53.5% | 24.4% | 73.8% |
| Single Copy | 1782 (44%) | 2401 (59.3%) | 2139 (52.9%) | 885 (21.9%) | 2981 (73.7%) |
| Duplicated | 23 (0.6%) | 5 (0.1%) | 26 (0.6%) | 100 (2.5%) | 5 (0.1%) |