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. 2024 Jan 5;17:1302957. doi: 10.3389/fnins.2023.1302957

Table 4.

Association of mental/neurological disorders with microbiota, metabolites, or neurotransmitter changes.

Disorder Associated microbiota Metabolite/neurotransmitter change/mechanism Reference
Attention-deficit-hyperactive disorder (ADHD) Lactobacillus spp., and Bifidobacterium spp. Tryptophan
↑ SCFAs
↑ Polyunsaturated fatty acids
↓ Dopamine
Barrett et al. (2013), Dinan et al. (2013), Erny et al. (2015), O’Mahony et al. (2015), Pärtty et al. (2015), and Bassett et al. (2019)
↑ Bifidobacterium genus It was assumed that the increase of Bifidobacterium was linked to significantly enhanced 16S-based predicted bacterial gene functionality encoding cyclohexadienyl dehydratase, the enzyme that is involved in the synthesis of phenylalanine (precursor of DA). Aarts et al. (2017)
Enterococcus spp., Escherichia spp., and Streptococcus spp. ↓ 5-HT Bull-Larsen and Mohajeri (2019)
Bifidobacterium spp.,
Enterococcus spp., Escherichia spp., Lactobacillus spp., Clostridia spp., Streptococcus spp.
↓ 5-HT Dam et al. (2019), Boonchooduang et al. (2020), and Eicher and Mohajeri (2022)
↑ Actinobacteria (genus Bifidobacterium)
↓ Firmicutes
Compensatory ↑ DA Aarts et al. (2017)
Autism spectrum disorder (ASD) fermenting bacteria:
Coprococcus, Prevotella, and Veillonellaceae
Kang et al. (2013)
↑ Bacteroidetes, Proteobacterium, Desulfovibrio species and Bacteroides vulgatus;
↓ Bifidobacterium genus, Firmicutes and Actinobacterium
LPS-induced inflammation
LPS decreases levels of glutathione, an important antioxidant involved in heavy metal detoxification in the brain
Zhu et al. (2007) and Finegold et al. (2010)
Hespellia,
Anaerostipes,
Desulfovibrio spp.
Finegold et al. (2010)
Alzheimer’s disease (AD) Escherichia coli, Bacillus subtilis, Mycobacterium tuberculosis, Salmonella enterica, Salmonella typhimurium, Staphylococcus aureus ↑ Bacterial amyloids production Jiang et al. (2017), Megur et al. (2021), Tran and Mohajeri (2021), and Eicher and Mohajeri (2022)
Anxiety-like behavior Lactobacillus spp. Glutamate is a key excitatory neurotransmitter in the CNS and excitatory amino acids Henter et al. (2021)
Bifidobacterium dentium,
↓ Lactobacillus brevis
↓ GABA Barrett et al. (2012)
Bipolar disorder (BD) Toxoplasma gondii Chronic inflammation Sutterland et al. (2015)
Bifidobacterium, Oscillibacter, Enterococcus, Flavonifractor, Streptococcus and Megasphaera; ↓ Roseburia, Faecalibacterium, and Ruminococcus McGuinness et al. (2022)
Fibromyalgia ↓ Diversity of bacteria; ↓ Bifidobacterium and Eubacterium genera Altered levels of glutamate and serine Clos-Garcia et al. (2019)
Bacteroides thetaiotaomicron, Bacteroides uniformis, Prevotella copri; ↑ Clostridium scindens, Enterocloster bolteae ↓ α-Muricholic acid and other secondary bile acids Minerbi et al. (2023)
Major depressive disorder (MDD) ↓ Coprococcus spp. and Dialister ↓ SCFAs Valles-Colomer et al. (2019), Socała et al. (2021), and Modesto Lowe et al. (2023)
Flavonifractor, Escherichia/Shigella and Veillonella;
Prevotella and Ruminococcus
↑ Bacteria associated with glutamate and GABA metabolism and ↓ bacteria producing SCFA(e.g., butyrate) McGuinness et al. (2022)
Lactobacillus, Streptococcus, and Enterococcus ↑ Increased lactic acid Valles-Colomer et al. (2019) and McGuinness et al. (2022)
Faecalibacterium and Coprococcus ↓ SCFAs (mainly butyrate)
Migraine ↓ Firmicutes family: Clostridial Clusters IV and XIVa, Coprococus spp., Eubacterium hallii Faecalibacterium prausnitzii, Lachnosiraceae spp., and Roseburia spp. ↓ 5-HT
↓ SCFAs (mainly butyrate)
Kappéter et al. (2023)
Akkermansia mucinophila, Alistipes putredinis, ↓ Bacteroides vulgatus and uniformis, Prevotella copri, Roseburia inulinivorans, Veilonella spp. ↓ Propionate synthesis and BBB protection from oxidative stress
Alcaligenes spp., Candida spp., Clostridium coccoides and propionicum, Eggerthella lenta, Micromycetes spp., Pseudonocardia spp., and Rhodococcus spp. Kopchak and Hrytsenko (2022)
Bacteroides and Coprococcus
Prevotella and Escherichia-shigella
↓ L-tryptophan, linoleic acid, and nicotinamide;
↑ L-arginine, glutamic acid, L-tyrosine, L-DOPA, 3-indoxyl sulfate
Wen et al. (2019)
Neuropathic pain ↑ Lactobacillus 41 Upregulated metabolites and 31 downregulated metabolites, among these, differentially expressed metabolites including allantoin, D-quinovose and D(−)-beta-hydroxy butyric acid, N6,N6,N6-trimethyl-l-lysine, 3-methylhistidine, exhibited consistent expression trends. The lower level of 2-hydroxybutyric acid was in both serum and spinal cord samples from CCI rats in comparison to sham rats Chen et al., 2021
↑ Lactobacillus ↑ SCFAs (propionate, and butyrate) Zhou et al. (2022)
Parkinson’s disease (PD) ↑ Bacteroidetes, Proteobacteria, and Verrucomicrobia;
↓ Firmicutes
↓ SCFAs chronic systemic inflammation (Shannon, 2022)
↓ Genera Blautia, Coprococcus, and Roseburia (butyrate-producing bacteria with anti-inflammatory properties)
↑ Proteobacteria (genus Ralstonia) with proinflammatory properties
↓ SCFAs (Keshavarzian et al., 2015)
Schizophrenia (SZ) Succinvibrio and Corynebacterium Association with the severity of symptoms Li et al. (2020)
Prevotella, Megasphaera;
Escherichia/Shigella and Veillonella;
Bacteroides, Haemophilus, Roseburia, and Streptococcus
McGuinness et al. (2022)
Bacteroides, Prevotella, and Clostridium are among the top 3 altered genera,
Bacteroides-Prevotella ratio ↑
↑ SCFAs Nguyen et al. (2019) and Li et al. (2023)
Ruminococcus Li et al. (2020)
Blautia Shen et al. (2018)
Toxoplasma gondii can cause a risk of mania developing Chronic inflammation Dickerson et al. (2014)
Stroke Enterobacteriaceae and Prevotella;
SCFA-producing bacteria;
↓ Lachnospiraceae and Ruminococcaceae;
↓ Firmicutes and Faecalibacterium;
↓↑ Bacteroidetes
↑ LPS,
↓ Butyric acid,
↓ SCFAs
Benakis and Liesz (2022)
Enterobacteriaceae
Clostridium tyrobutyricum
↑ LPS,
↓ Metabolites of the tryptophan-kynurenine pathway and ↑ indole metabolites, impairing the integrity of BBB;
↓ SCFAs and bile acids
Zeng et al. (2023)
Traumatic brain injury ↑ Metabolites concerned with late glycolysis, cysteine, and one carbon metabolites, as well as metabolites affected by arginine metabolism, endothelial dysfunction, and responses to hypoxia Coleman et al. (2023)
7-Day post-TBI:
Streptococcus (Streptococcaceae)
Akkermansia (Verrucomicrobia)
↓ Bacterial secretion system, sulfur metabolism, biosynthesis of steroids, no-homologous end-joining, and protein processing in the endoplasmic reticulum;
↑ Epithelial cell signaling in Helicobacter pylori infection and pentose as well as glucuronate interconversions;
↑ Indole-3-acetaldehyde (IAAld) and indole-3-ethanol (IEt);
↑ 5-HT;
↓ Indole-3-lactic acid (ILA) and skatole;
↓ Melatonin and 5-hydroxy indole acetic acid (5-HIAA);
Tryptophan metabolism through the ↑ kynurenine (KYN) and ↓ neuroprotective kynurenic acid (KYNA);
↓ Xanthurenic acid (XA);
↑ KYN/Tryptophan and ↓ KYNA/KYN correlation indicates increased metabolism through the neurotoxic pathway
Zheng et al. (2022)
28-Day post-TBI:
Streptococcus (Streptococcaceae), Proteobacteria, TM7 and Actinobacteria;
↓Verrucomicrobia, Bacteroidetes, Cyanobacteria, and Deferribacteres
↓ Gut microbiota functions of biosynthesis, including lipopolysaccharide, n-Glycan, primary and secondary bile acid, and steroids;
↑ Metabolism of chlorophyll, glycerophospholipid, thiamine, porphyrin, and riboflavin;
↑ 5-HT;
↑ Tryptophan metabolism through the kynurenine KYNA is often considered to be neuroprotective;
↑ The ratio KYNA/KYN;
↓ Melatonin, 5-HIAA and XA
Zheng et al. (2022)
Visceral pain ↑ Phylum Bacteroidetes, Proteobacteria, and Tenericutes;
Phylum Firmicutes and Actinobacteria
In rats aged 4 and 8 weeks during 4 and 6 weeks after vancomycin administration in dose 100 mg/kg (O’Mahony et al., 2014)
Activation of the immune, humoral, and neuroendocrine (hypothalamic–pituitary–adrenal axis) systems, both autonomic (nervus vagus) and enteric nervous systems, spinal afferents nerves, 5-HT, SCFAs, tryptophan-related metabolites, and neurometabolites (dopamine, GABA, noradrenaline) potentially modulating function of CNS
Histamine produced by microbiota and visceral pain
Moloney et al. (2015, 2016), Agirman et al. (2021), and De Palma et al. (2022)