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. 2005 Mar 23;6:44. doi: 10.1186/1471-2164-6-44

Table 1.

The hypergeometric test for the co-expression effect among neighboring genes. For every correlation threshold, the number of pair-wise correlations for the adjacent genes that are above the threshold was counted. The probability of randomly drawing such high numbers of gene pairs above the threshold from all of the gene pairs is determined by a hypergeometric distribution, as indicated by the p-values.

Total gene pairs Neighboring gene pairs Threshold for correlations Number of total gene pairs above the threshold Number of neighboring gene pairs above the threshold P-values based on the hypergeometric tests
18,797,646 6,116 0.5 616,074 752 2.00e-008
0.6 251,505 401 4.84e-009
0.7 89,955 196 1.04e-008
0.8 21,513 68 1.92e-008
0.9 1,171 13 4.07e-009