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. 2022 Nov 16;24(4):e202200537. doi: 10.1002/cbic.202200537

Table 1.

A decade of racemic protein crystallography (at the time of writing).

Protein

Function

Length[a]

Res. [Å]

Space group

PDB accession

Structural insights

Ref.

Lacticin Q

Bacteriocin

53

0.96

P1

7P5R

First reported crystal structure

[31]

CyO2

Bracelet cyclotide

30

1.17

P1211

7RMQ

First reported crystal structures of bracelet cyclotides

[32]

CyO2 (I11L)

1.04

P1211

7RMR

CyO2 (I11G)

1.10

P1211

7RMS

Hyen D

1.35

P1211

7RIH

Hyen D (I11L)

1.22

P
1

7RII

Hyen D (I11G)

1.30

P1

7RIJ

Calcicludine

Kunitz‐type serine protease inhibitor homolog

60

2.52

I41

6KZF

Confirmation of novel disulfide surrogate bridge strategy (DADA)

[33]

rC5a‐desArg

Rat anaphylatoxin

76

1.80

P1

[g]

New insights on C‐terminal conformation

[34]

Chimeric‐rC5a

77

1.31

P212121

g

Chimeric protein probes conjugated to small‐molecule antagonist

[35]

rC5a

1.58

P
1

g

M2‐TM[b]

Ion channel TM helix

24

2.00

P21 /c

4RWB

Investigations of a heterochiral coiled coil

[27b]

M2‐TM[c]

1.05

P
1

4RWC

M2‐TM (I39A)[c]

1.55

P
1

6MPL

[27a]

M2‐TM (I42A)[c]

1.40

P
1

6MPM

M2‐TM (I42E)[c]

1.40

P
1

6MPN

Melittin

Honeybee venom

27

1.27

C2

6O4M

Retention of native quaternary structure

[36]

Ribifolin

Orbitides from Jatropha

8

0.99

P121/n1

6DKZ

Unveil structures of Jatropha orbitides

[37]

Pohlianin C

8

1.20

Pcab

6LD0

Jatrophidin

8

1.03

P121/n1

6DL1

GsMTx4

Spider venom

34

1.75

P
3

g

First reported crystal structure

[38]

BTD‐2

Baboon θ‐defensin

18

1.45

P
1

5INZ

Novel oligomeric state resembles mechanistically relevant assembly

[39]

Snakin‐1

Potato snakin

63

1.50

P1

5E5Y

Novel use of radiation damage induced phasing of quasi‐racemic crystals

[40]

1.60

P21/c

5E5Q

1.57

P21/c

5E5T

Ubiquitin

Ubiquitin

76

1.95

[d]

[g]

Confirm folding of synthetic protein

[41]

M1‐linked tri‐Ubs

76[e]

1.80

P1

5GO7

D‐monomeric Ub can facilitate Ub oligomer crystallization

[28]

M1‐linked tetra‐Ub

2.18

P21

5GO8

K6‐linked di‐Ub

1.15

P1

5GOB

K11‐linked di‐Ub

1.73

P1

5GOC

K27‐linked di‐Ub

1.15

P1

5GOD

K29‐linked di‐Ub

1.98

P2

5GOG

K33‐linked di‐Ub

1.95

P1

5GOH

K48‐linked di‐Ub

1.59

P1

5GOI

K63‐linked di‐Ub

1.55

P21212

5GOJ

K11/K63‐linked tri‐Ub

1.84

P22121

5GOK

K27‐linked di‐Ub

152

1.55

C2

5J8P

Largest true synthetic racemic proteins to be crystallized

[42]

K27‐linked tri‐Ub

228

2.10

H3

5JBV

VHP

Vinillin headpiece domain

35

2.10

P
1

3TRW

Investigation of pentafluoro phenylalanine (F5Phe) amino acids on protein structure

[43]

VHP

2.30

I‐4c2

3TRY

VHP (F5Phe10)

1.46

F222

3TJW

VHP (F5Phe17)

1.00

P1

3TRV

VHP (β3‐hGln26)

1.30

P1

5I1N

Investigation of beta amino acids on protein structure

[44]

VHP (ACPC26)

1.35

P1

5I1O

VHP (β3‐hLys30)

1.40

P1

[g]

VHP (APC30)

1.12

P1

5I1S

Ts3

Scorpion venom

64

1.93

P
1

5CY0

First reported structure of Ts3

[45]

Magainin 2 (L‐1)

Amphibian HDP

23

1.75

I‐42d

4MGP

Beta amino acid variants investigating phenylalanine zipper motif

[46]

Magainin 2 (L‐2)

2.20

P21212

5CGN

[47]

Magainin 2 (L‐3)

1.50

P1

5CGO

ShK

Sea anemone venom

35

0.97

P121/c

4LFS

Structure variation to NMR and enantiospecific activity

[48]

ShK analogue

1.20

H‐3

4Z7P

Structure activity relationships

[49]

ShK (allo‐Thr13)

0.90

P1

5I5B

Investigation of side chain chirality on protein structure

[50]

ShK (allo‐Thr31)

1.30

P1211

5I5C

ShK (allo‐Ile7)

1.20

C2

5I5A

Rv1738

M. tuberculosis protein

94

1.50

C12/c1

4WPY

First reported structure, unknown function

[51]

STFI‐1

Sunflower trypsin inhibitor

14

1.25

P
3

4TTK

Disulfide‐rich scaffolds for drug design

[52]

cVc1.1

Cone snail venom

22

1.70

Pbca

4TTL

kB1

Plant cyclotide

29

1.90

P
1

4TTM

kB1 (G6A)

1.25

P
1

4TTN

kB1(V25A)

2.30

P
1

4TTO

Ser‐CCL1

Chemokine

73

2.15

P1

4OIJ

Crystal structure of a homogenous, glycosylated chemokine

[53]

Glycosylated Ser‐CCL1

73[f]

2.10

P1

4OIK

DKP Ester Insulin

Synthetic hormone+derivatives

51

1.60

P
1

4IUZ

Confirm folding of synthetic derivative

[54]

Ester insulin

1.50

I213

5EN9

Confirmation of correctly folded synthetic protein for isotope experiments

[55]

Human insulin

1.35

I213

5ENA

VEGF‐A/antagonist complex

Vascular endothelial growth factor A+D‐protein binder

102+56

1.60

P21/n

4GLN

First reported structure of a heterochiral protein complex by racemic crystallography

[56]

Crambin analogue

Thionin protein

46

1.08

P1211

3UE7

Novel linear‐loop peptide chain topology

[29a]

Kaliotoxin

Scorpion venom

38

0.95

P
1

3ODV

Basis for structure activity relationships

[57]

Omwaprin

Snake venom

50

1.30

P21/c

3NGG

First reported structure

[30]

[a] Total amino acid length of synthetic protein enantiomer. [b] Crystallized from monoolein lipidic cubic phase. [c] Crystallized from racemic lipids. [d] Data unavailable. [e] Residues in D‐protein enantiomer. [f] 73 residues+oligosaccharide. [g] Not reported/deposited.