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. 2024 Jan 23;14:52. doi: 10.1038/s41398-024-02758-6

Fig. 4. Pseudo-bulking the LS cluster data reveals three groups of neurons.

Fig. 4

A Principal Component Analysis of LS clusters pseudo-bulked expression profiles across all samples. B Heatmap of genes enriched in group 1 (LS_In.C and LS_In.N), group 2 (LS_In.D, LS_In.M, LS_In.P, LS_In. Q, and LS_In.R) and previously calculated markers for LS_In.O, Sept_In.G, and Sept_In.I across our neuronal clusters. Normalized expression values (logcounts) centered and scaled. Violin plots of these genes expressed across LS populations for group 1 (CF) and group 2 (GJ) highlight the specificity of these markers.