Extended Data Table 1.
Data Collection, data processing and validation statistics
Data Collection and Processing | |
---|---|
| |
Microscope | Titan Krios |
Voltage (keV) | 300 |
Camera | K3 |
Magnification | 105,000 |
Pixel size at detector (Å/pixel) | 0.83 |
Total electron exposure (e−/Å2) | 60.8 |
Exposure rate (e−/pixel/sec) | 28.6 |
Number of frames collected during exposure | 50 |
Defocus range (μm) | −1.0 to −2.5 |
Automation software | SerialEM 3.8 |
Energy filter slit width (eV) | 20 |
Micrographs collected (no.) | 5,934 |
Micrographs used (no.) | 28,309 |
Total extracted particles (no.) | 10,802,676 |
Refinement | |
Refined particles (no.) / Final particles (no.) | 1,234,038/229,147 |
Symmetry parameters | C2 |
Map resolution (Å) | 3.2 |
FSC 0.143 (unmasked / masked) | 4.0/3.2 |
Resolution range (Å) | 2.9 to 11.1 |
Resolution range due to anisotropy (Å) | 3.3 to 3.7 |
Map sharpening B factor range (Å2) | −144.2 |
Map sharpening methods | LocalDeblur |
Model composition | |
Chains | 6 |
Protein residues | 816 |
Validation | |
Model-Map scores | |
CC (correlation coefficients) | 0.77 |
Average FSC (0 / 0.143 / 0.5) | 2.2/3.3/3.5 |
R.m.s. deviations from ideal values | |
Bond lengths (Å) | 0.004 |
Bond angles (°) | 0.787 |
MolProbity score | 1.85 |
CaBLAM outliers | 3.02 |
Clashscore | 6.81 |
Poor rotamers (%) | 0.26 |
C-beta outliers (%) | 0.00 |
Ramachandran plot | |
Favoured (%) | 92.36 |
Allowed (%) | 7.64 |
Outliers (%) | 0.00 |