Table 1.
Genetic statistics of nucleotide variation calculated for the datasets used in the present study.
| Dataset | No. of loci | No. of taxa | Alignment length (bp) | Percentage missing data | S (%) | PIS ( %) | Supported nodes (%) |
|---|---|---|---|---|---|---|---|
| Cactaceae591 | 459 | 146 | 511 090 | 15.75 | 287 596 (0.563) | 171 109 (0.335) | 94.1/93.5 |
| Angiosperm353 | 318 | 84 | 136 589 | 12.63 | 59 975 (0.439) | 27 508 (0.201) | 82.3/87.1 |
| Shared loci Cactaceae591 and Angiosperm353 | 5 | 105 | 2873 | 25.53 | 1222 (0.425) | 601 (0.209) | – |
| Gene-scale | 10 | 209 | 9923 | 34.36 | 3502 (0.353) | 1901 (0.191) | 63.4 |
S: variable sites, PIS (%): parsimony-informative sites (proportion of PIS). Supported nodes: percentage of supported nodes from concatenated inferences for the gene-scale (ultrafast bootstrap > 95) and from concatenated and coalescent inferences for the genome-scale datasets (ultrafast bootstrap > 95/local posterior probability > 0.8). No. of taxa includes both ingroup and outgroup sampled taxa in each dataset.