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. 2024 Jan 25;13:41. doi: 10.1186/s13643-023-02419-7

Table 1.

Characteristics of included studies

Author/ year Country Sample size cases/controls Samples Type of cancer Detection Method Microbiome Outcome Multivariate analyses Study design NOS score
Mima/2016 [8] USA 1069 tissue CRC PCR F. nucleatum OS, DSS The amount of Fusobacterium nucleatum DNA P 7
Neuzillet/2021 [9] France 151 tissue OSCC 16S rRNA sequencing F. nucleatum PFS, OS F. nucleatum status, UICC stage, TP53 mutational status R 6
Mitsuhashi/2015 [10] Japan 283 tissue PC TaqMan gene expression assay F. nucleatum DSS Fusobacterium species, CIMP status, and expression level of microRNA-31 P 6
Mohamed/2021 [11] Norway 72 (59/13) saliva OSCC NGS genus Malassezia OS salivary carriage of both Candida and Malassezia, age P 7
Du/2022 [12] Sweden 482 saliva NPC 16S rRNA sequencing microbial diversity OS, DSS Faith’s PD diversity, Observed ASVs diversity, Shannon diversity P 7
Wei/2016 [13] China 180 tissue CRC RNAsequencing and PCR F. nucleatum DFS, OS CEA, TNM stage, B. fragilis, F. nucleatum P 7
Lee/2018 [20] Korea 246 tissues CRC PCR F. nucleatum DFS, OS Differentiation, CIMP, Metastatic site, F. nucleatum amount P 6
Jeong Oh/2018 [17] Korea 593 tissues CRC PCR F. nucleatum DFS No R 7
Chen/2020 [18] Taiwan 156 oralbiofilms ESCC PCR P. gingivalis OS Clinical stage, P. gingivalis staining, Response to Neoadjuvant, Treatment P 8
Yu/2018 [25] China 196 tissue CRC RNA-sequencing and PCR F. nucleatum RFS F. nucleatum abundance, AJCC stage R 6
Qiao/2022 [24] China 802 tissue NPC 16S rRNA sequencing and PCR bacterial load DFS, OS sex, age, stage, pathological type, intratumoral bacterial load, and chemotherapy R 7
Gao/2016 [16] China 130 (100/30) tissue ESCC PCR P. gingivalis OS No P 7
Yamamura/2016 [17] Japan 325 tissues ESCC PCR F. nucleatum DSS Performance status, Tumor stage, Fusobacterium R 5
Yan/2017 [18] China 280 tissues CRC PCR F. nucleatum DFS, DSS Tumor invasion, Lymph node metastasis, Distant metastasis, Serum CEA level, Fusobacterium level R 6
Gao/2018 [19] China 226 (146/80) serum ESCC ELISA P. gingivalis OS N-stage, IgG (EU), IgA (EU) P 7

CRC colorectal cancer, DFS disease free survival, DSS Disease Free Survival, ELISA enzyme-linked immunosorbent assay, ESCC esophageal cancer, F. nucleatum Fusobacterium nucleatum, NGS next generation sequencing, NPC nasopharyngeal carcinoma, OS overall survival, OSCC oral squamous cell carcinoma, P Prospective Cohort, PC pancreatic cancer, PCR polymerase chain reaction, PFS progression free survival, P. gingivalis Porphyromonas gingivalis, R Retrospective Cohort, RFS Recurrence free survival. CIMP CpG island methylator phenotype