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. 2005 Mar;43(3):1112–1117. doi: 10.1128/JCM.43.3.1112-1117.2005

TABLE 1.

Primer and probe sequences for RT-PCR and Southern oligoprobe confirmation

Name Geno- group Sense Use Sequence (5′ to 3′)
Mon 432 GI + Primer TGGACICGYGGICCYAAYCA
Mon 434 GI Primer GAASCGCATCCARCGGAACAT
Mon 431 GII + Primer TGGACIAGRGGICCYAAYCA
Mon 433 GII Primer GAAYCTCATCCAYCTGAACAT
NVp35 NVIS Primer CTTGTTGGTTTGAGGCCATAT
NVp36 NVIS + Primer ATAAAAGTTGGCATGAACA
Mon 458 B/I GI + Probe ATGTATGTRCCAGGATGGCARGCC
Mon 456 B/I.1 GI + Probe ATGTATGTCCCAGGATGGCAGGCC
Mon 457 B/I.2 GI + Probe ATGTATGTGCCAGGATGGCAAGCC
Mon 453 B/I.3 GI + Probe ATCTACATHCCTGGTTGGCAGGCC
Mon 454 B/I.4 GI + Probe ATACAGGAGATAAAGACTGGTGGT
Mon 455 B/I.5 GI + Probe ATGTATGTGCCAGGCTGGCAGGCC
Mon 459 B/II GII + Probe ATGGATTTTTACGTGCCCAGGCAA
Mon 451 B/II.1&4 GII + Probe GACCCATCTGAAACAATGATWCCA
Mon 460 B/II.2 GII + Probe AGCAAGATCAGCAAGCTTGTGATA
Mon 461 B/II.3 GII + Probe GACCCCAGTGAAACCATGATACCA
Mon 449 B/II.5 GII + Probe AATGAAACAATGATACCTCACTCT
Mon 448 B/II.6&7 GII + Probe GAGAACCCATACGAGAGCATGGTC