TABLE 3.
PCR primers used for VNTR analysis of meningococcal strains in this study
Primer designation | Primer sequence (5′→3′) | Annealing temp (°C) | Product sizea (bp) |
---|---|---|---|
VNTR01 F | GACGGGTCAAAAGACGGAAG | 59 | 485 |
VNTR01 R | GGCATAATCCTTTCAAAACTTCG | ||
VNTR02 F | CTCCCCGATAGGCCCCGAAATACC | 57 | 606 |
VNTR02 R | AAAGCGGCGGGAATGACGAAGAGT | ||
VNTR06 F | CCGGCGGCGCGTGATGACTT | 63 | 466 |
VNTR06 R | GCAGAAACCCCGCAGACAGGATGG | ||
VNTR08 F | GACCCTGACCGTCGGAAACC | 57 | 312 |
VNTR08 R | ATACCGCCCTGCTGTTGTGC |