| ATP | Adenosine triphosphate |
| ATRA | All-trans retinoic acid |
| ATO | Arsenic trioxide |
| ATF2 | Activating Transcription Factor 2 |
| ATF1 | Activating Transcription Factor 1 |
| AP-1 | Jun Proto-Oncogene, AP-1 Transcription Factor Subunit |
| ASCL1 | Achaete-Scute Family BHLH Transcription Factor 1 |
| ATF4 | Activating Transcription Factor 4 |
| ATF7 | Activating Transcription Factor 7 |
| ARID3A | AT-Rich Interaction Domain 3A |
| ARID1A | AT-Rich Interaction Domain 1A |
| ASCL2 | Achaete-Scute Family BHLH Transcription Factor 2 |
| ARNT | Aryl Hydrocarbon Receptor Nuclear Translocator |
| ATRA | All-trans retinoic acid |
| ATO | Arsenic trioxide |
| AKT1 | AKT Serine/Threonine Kinase 1 |
| Ape/Ref-1 | apurinic endonuclease/redox factor-1 |
| BMSCs | Bone-marrow-derived mesenchymal stem cells |
| BCL6 | B-Cell Lymphoma 6 Protein |
| BACH2 | BTB Domain and CNC Homolog 2 |
| BM | Bone marrow |
| BMMNC | BM mononuclear cells. |
| BRAF | B-Raf Proto-Oncogene, Serine/Threonine Kinase |
| CML | Chronic myeloid leukemia |
| CRC | Colorectal cancer |
| CDR1-AS | CDR1 Antisense RNA |
| CEBPA | CCAAT/Enhancer-Binding Protein Alpha |
| CTCF | CCCTC-Binding Factor |
| CTSC | Cathepsin C |
| CHOP10 | DNA Damage-Inducible Transcript 3 |
| CDC25 | Cell Division Cycle 25 |
| CXCL14 | C-X-C Motif Chemokine Ligand 14 |
| CXCR4 | C-X-C Motif Chemokine Receptor 4 |
| C-JUN | Jun Proto-Oncogene, AP-1 Transcription Factor Subunit |
| c-MYC | Myc Proto-Oncogene Protein |
| CREB1 | Cyclic AMP-Responsive Element-Binding Protein 1 |
| CDK | Cyclin-dependent kinase. |
| CDK7 | Cyclin-dependent kinase 7 |
| DUSP1 | Dual Specificity Protein Phosphatase 1 |
| DUSP10 | Dual Specificity Protein Phosphatase 10 |
| DUSP16 | Dual Specificity Protein Phosphatase 16 |
| DBA | Dibenzylideneacetone |
| DCs | Dendritic cells |
| DKK-1 | Dickkopf WNT Signaling Pathway Inhibitor 1 |
| DNAM1 | CD226 Antigen |
| EPD | Eukaryotic Promotor Database |
| EMT | Epithelial–mesenchymal transition |
| E2F1 | E2F Transcription Factor 1 |
| EGR1 | Early Growth Response 1 |
| EP300 | E1A-Binding Protein P300 |
| ELK1 | ETS Transcription Factor ELK1 |
| ESCC | Esophageal squamous cell carcinoma |
| EPD | Eukaryotic Promotor Database |
| EEF2K | Eukaryotic Elongation Factor 2 Kinase |
| ESCC | Esophageal squamous cell carcinoma |
| ERK1/2 | Extracellular Signal-Regulated Kinase 2 (MAPK1) |
| FOXP3 | Forkhead Box P3 |
| FGFR1 | Fibroblast Growth Factor Receptor 1 |
| FOXM1 | Forkhead Box M1 |
| GA | Gambogic acid |
| GDF4 | Growth Differentiation Factor 4 |
| GADD45A | Growth Arrest and DNA Damage-Inducible Alpha |
| G-CSF | Granulocyte colony-stimulating factor |
| HEK293 | Human Embryonic Kidney cell line |
| HIF1A | Hypoxia-Inducible Factor 1 Subunit Alpha |
| HDAC3 | Histone Deacetylase 3 |
| HDAC9 | Histone Deacetylase 9 |
| HCC | Hepatocellular carcinoma |
| HO-1 | Heme oxygenase-1 |
| Imp 7/3 | Importin-7 |
| Imp 9/3 | Importin-9 |
| LncRNAs | Long noncoding RNA |
| IL-6 | Interleukin 6 |
| IL-8 | Interleukin 8 |
| IL-12B | Interleukin 12β |
| IAV | Influenza A virus |
| IKK | Inhibitor of Nuclear Factor Kappa-B Kinase |
| IRAK4 | Interleukin 1 Receptor-Associated Kinase 4 |
| IGF-1 | Insulin-like growth factor 1 |
| JUN | Jun Proto-Oncogene, AP-1 Transcription Factor Subunit |
| JAK | Janus Kinase |
| KLF4 | Kruppel-Like Factor 4 |
| KAT2B | Lysine Acetyltransferase 2B |
| KRAS | KRAS Proto-Oncogene, GTPase |
| LINCRNA | Long intergenic non-coding RNA |
| LPS | Lipopolysaccharide |
| MM | Multiple myeloma |
| MDR | Multidrug Resistance Protein |
| MAPK | Mitogen-activated protein kinase |
| MGUS | Monoclonal gammopathy of unknown significance |
| MKKs | MAP kinase kinases |
| MW | Molecular weight |
| MEF2 | Myocyte Enhancer Factor 2 |
| MSK1 | Nuclear Mitogen- And Stress-Activated Protein Kinase 1 |
| MSK2 | Nuclear Mitogen- And Stress-Activated Protein Kinase 2 |
| MAPKAPK2 | MAPK-Activated Protein Kinase 2 |
| MART | Melanoma Antigen Recognized By T-Cells 1 |
| MAP3K71P1 | TGF-Beta-Activated Kinase 1 (MAP3K7)-Binding Protein 1 |
| MAP2K3 | Mitogen-Activated Protein Kinase Kinase 3 |
| MKK3 | MAP kinase kinases 3 |
| MAP2K4 | Mitogen-Activated Protein Kinase Kinase 4 |
| MKK4 | MAP kinase kinases 4 |
| MAP2K6 | Mitogen-Activated Protein Kinase Kinase 6 |
| MKK6 | MAP kinase kinases 6 |
| MYB | MYB Proto-Oncogene, Transcription Factor |
| MK2 | MAPK Activated Protein Kinase 2 |
| MK3 | MAPK Activated Protein Kinase 3 |
| mRNA | Messenger RNA |
| MMP-2 | Matrix Metallopeptidase 2 |
| MMP-9 | Matrix Metallopeptidase 9 |
| MYC | MYC Proto-Oncogene, BHLH Transcription Factor |
| MSCs | Mesenchymal stem cells |
| MKK6 | Mitogen-Activated Protein Kinase Kinase 6 |
| MDS | Myelodysplastic syndrome |
| MCP1 | C-C Motif Chemokine Ligand 2 |
| mTOR | Mechanistic Target Of Rapamycin Kinase |
| NHL | Non-Hodgkin’s lymphoma |
| NSPCs | Neural stem/progenitor cells |
| NFKB1 | Nuclear Factor Kappa B Subunit 1 |
| ND8/34 | Cell Line from mouse |
| NSCLC | Non-small-cell lung cancer |
| NOTCH3 | Notch Receptor 3 |
| NKG2D | NK Cell Receptor D |
| OSCs | Osteosarcoma cells |
| PINT | p53-induced noncoding transcript. |
| PCAT1 | Prostate Cancer-Associated Transcript 1 |
| POU1F1 | Pituitary Transcript Factor 1 |
| PPMID | Protein Phosphatase Magnesium-Dependent 1 Delta |
| P53 | Tumor Protein P53 |
| P38 | Mitogen-activated protein kinase p38 |
| PRKD1 | Protein Kinase D1 |
| PRAK | MAPK Activated Protein Kinase 5 |
| rRNA | Ribosomal RNA |
| RAC3 | Rac Family Small GTPase 3 |
| RAF | Raf-1 Proto-Oncogene, Serine/Threonine Kinase |
| SRF | Serum Response Factor |
| STMN1 | Stathmin 1 |
| STAT1 | Signal Transducer and Activator of Transcription 1 |
| STAT3 | Signal Transducer and Activator of Transcription 3 |
| STAT4 | Signal Transducer and Activator of Transcription 4 |
| SMAD2 | SMAD Family Member 2 |
| SMAD3 | SMAD Family Member 3 |
| SMAD4 | SMAD Family Member 4 |
| SP1 | Specificity Protein 1 |
| SYK | Spleen-Associated Tyrosine Kinase |
| SNGH5 | Small Nucleolar RNA Host Gene 5 |
| SDF1 | C-X-C Motif Chemokine Ligand 12 |
| TCR | T-cell receptor |
| TAB1 | TAK1-Binding Protein 1 |
| TNF-α | Tumor necrosis Factor alfa |
| TP53 | Tumor Protein P53 |
| TGF-β | Transforming Growth Factor Beta 1 |
| TNBC | Triple-negative breast cancer |
| Tris DBA | Tris(dibenzylideneacetone)dipalladium |
| TAK1 | Mitogen-Activated Protein Kinase Kinase Kinase 7 |
| TOPK/PBK | Cell-derived protein kinase T-LAK/PDZ-binding kinase |
| TLR5 | Toll Like Receptor 5 |
| TLR7 | Toll Like Receptor 7 |
| TLR9 | Toll Like Receptor 9 |
| VEGF | Vascular endothelial growth factor |
| VDR | Vitamin D Receptor |
| XBP1 | X-Box-Binding Protein 1 |
| YY1 | YIN-YANG-1 |
| ZAP70 | 70 KDa Zeta-Chain-Associated Protein |
| ZCCHC14 | Zinc Finger CCHC Domain-Containing Protein 14 |