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. 2023 Dec 29;23:638–647. doi: 10.1016/j.csbj.2023.12.036

Table 3.

Summary of WGS data and genomic comparisons of CRISPR/Cas engineered iPSC lines.

Cell line ID Genome coverage Unique SNVs Unique indels Unique SVs
HNDS0068-01 #B CNC14 42.5 202 40 0
HNDS0068-01 #B CC3 37.1 229 24 0
HNDS0078-01 #D CNC2 49.2 217 49 0
HNDS0078-01 #D CC8 49.6 242 40 0
HNDS0078-01 #D CC18 39.9 194 34 0
HNDS0072-01 #C CNC87 36.3 363 36 0
HNDS0072-01 #C CC80 43.8 327 44 1
HNDS0072-01 #C CC20 41.8 343 46 0
31 CC-het 42.8 432 77 0
31 CC-hom 33.4 792 73 1
1-1134-003_CNC5 45.4 190 48 0
1-1134-003_CC10 45.2 220 46 0
1-1217-003_CNC36 32.2 265 60 0
1-1217-003_CC37 39.2 260 64 0
1-1006-003_CNC35 39.4 268 64 0
1-1006-003_CC9 44.3 234 71 0