| DNA | Deoxyribonucleic acid |
| GC | Gentamycin and chloramphenicol |
| HIV | Human immunodeficiency virus |
| IHU | Méditerranée Infection: Institut Hospitalo-Universitaire Méditerranée Infection |
| ITS | rRNA internal transcribed spacers |
| SDA | Sabouraud dextrose agar |
| LSU | Large subunit of the rRNA |
| MALDI-TOF MS | Matrix-assisted laser desorption ionization time-of-flight mass spectrometry |
| MP | Maximum parsimony |
| NA | Not available |
| PCA | Principal component analysis |
| rRNA | Ribosomal ribonucleic acid |
| SSU | Small subunit of the rRNA |
| TEF-1-α | Partial translation elongation factor-1 alpha gene |
| TUB2 | Partial β-tubulin gene |
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