Table 3.

Sequence alignments of four FCV isolates (FCV-Diva (cat 15), FCV-Diva (cat 24), FCV-Merial (FCV-F9), and FCV-Ari)

Isolates	Genomic sequence
	6585
FCV-Cat 15	ACAATACCTA ATAAGCTCAT TCCGGCTGGT GATTATGCTA TTACCAATCA
FCV-Cat 24	ACAATACCTA ATGAGCTCAT TCCGGCTGGT GATTATGCTA TTACCAATCA
FCV-Merial	ANAATTCCTG GGGAGTCGAT ACCANNTGGC GATTACACAA TCACCAATGG
FCV-Ari	ACAATCCCTG AGAAGCTGAC ACCTGCTGGC GATTACGCCA TCGTAGATGG
	6635
FCV-Cat 15	GAGTGGCAAT GATATACAAA CAAAAGAGGA ATACGAATCT GCCATGATAA
FCV-Cat 24	GAGTGGCAAT GATATACAAA CAAAAGAGGA ATACGAATCT GCCATGATAA
FCV-Merial	TACTGGCAAT GACATCACCA CGGCTACAGG ATATGACACT GTTGATNTAA
FCV-Ari	ATCAGGCAAT GACATCACAA CTAAGGATAA ATATGAAAGT GCTGATGTGA
	6685
FCV-Cat 15	TCAGCAACAA CACAAATTTC AAAAGCATGT ACATTTGTGG GTCCCTTCAA
FCV-Cat 24	TCAGCAACAA CACAAATTTC AAAAGCATGT ACATTTGTGG GTCCCTTCAA
FCV-Merial	TTAAGAACAA TACCAACTTT AAGGGCATGT ACATATGTGG TTCGCTCCAG
FCV-Ari	TCAAGAATAA CACCAATTTC AGGGGCATGT ACATTTGTGG CTCACTTCAA
	6735
FCV-Cat 15	CGAGCGTGGG GTGACAAGAA AATATCCAAC ACTGCTGT
FCV-Cat 24	CGAGCGTGGG GTGACAAGAA AATATCCAAC ACTGCA∼∼
FCV-Merial	CGTGCCTGGG GTGACAAGAA AATATCCAAC ACTGCA∼∼
FCV-Ari	AGAGCATGGG GTGACAAGAA AATATCCAAC AGTGCA∼∼

Sequences are from region E of the capsid gene (nucleotides 6585 and 6767 of the FCV genome).