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. 2024 Jan 29;23:37. doi: 10.1186/s12934-023-02277-x

Table 6.

The maximum rates of succinate growth-coupled production in iML1515 in rich medium (Strain0 in LB medium)

Number of knocked out reactions Deleted reactions Biomass formation rate (h−1) Succinate production rate (mmol.gDW−1 h−1) Deleted genes Co-Knockout reactions
Single ARGDC 1.08 19.72 b4117
Double ARGDC, FADRx 1.05 22.09 b4117, b3844 FADRx, FE3Ri, FLVRx
Triple NDPK5, ASPTA, ARGDC 1.03 28.14 b0474, b2518, b0928, b4054, b4117 ADK1, NDPK2, ADNK1, NDPK3, NDPK6, DADK, ADK4, NDPK1, ADK3, NDPK4, NDPK7, NDPK8, TYRTA, PHETA1, LEUTAi
Quadruple NDPK5, PFL, LDH_D, ACALD 0.75 40.97 b0474, b2518, b2579, b3952, b0902, b3951, b0903, b3114, b1380, b0351, b1241 ADK1, NDPK2, ADNK1, NDPK3, NDPK6, DADK, ADK4, NDPK1, ADK3, NDPK4, NDPK7, NDPK8, OBTFL, ALCD2x, ALCD19