Table 3.
Identified differentially expressed genes (S_2 vs S_0)
|
Gene_id
|
Readcount_S_2
|
Readcount_S_0
|
Log2 fold change
|
P value
|
Padj
|
Gene name
|
Description
|
| Gene509 | 376.5506144 | 256.0954025 | 0.55616 | 0.0066152 | 0.035684 | HPG27_RS02500 | Cag pathogenicity island protein Cagl |
| Gene521 | 1368.459246 | 801.0552768 | 0.77258 | 5.49E-05 | 0.00089411 | HPG27_RS02560 | Type IV secretion system apparatus protein CagT |
| Gene511 | 1617.425068 | 1154.535615 | 0.48639 | 0.005033 | 0.28476 | HPG27_RS02510 | Type IV secretion system apparatus protein Cag3 |
| Gene540 | 181710.1299 | 131892.6179 | 0.46228 | 0.0039181 | 0.023777 | HPG27_RS02655 | Type IV secretion system oncogenic effector CagA |
| Gene536 | 1945.873607 | 3339.614831 | -0.77926 | 0.00032024 | 0.0036791 | HPG27_RS02635 | VirB4 family type IV secretion/conjugal transfer ATPase |