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. Author manuscript; available in PMC: 2024 Jan 29.
Published in final edited form as: Nat Protoc. 2021 Oct 11;16(11):5030–5082. doi: 10.1038/s41596-021-00593-3

Extended Data Figure 3.

Extended Data Figure 3.

Sensitivity of the simulation results depending on the value of the amplitude of the demographic noise. Starting with a simulation identical to the one in Procedure 7, we repeated it with two different magnitudes of the noise amplitude σ: a) images of three replicas of a colony simulation and b) plot of the total biomass change with time of the three replicas simulations with σ=0.01; c) images of three replicas of a colony simulation and d) plot of the total biomass change with time of the three replicas simulations with σ=0.01. A finalized result of a simulation study in presence of noise should be averaged over several replicas of the stochastic simulation. The change of the noise amplitude however may have a significant effect of the growth rate and the final morphology. The value of the noise amplitude should be chosen to best represent an experimental result.