TABLE 3.
Comparison of Cp values of UNC NoV and Kageyama NoV TaqMan RT-PCR assays by using RNA from 20 NoV strainsa
| Strain (genotype) | Cp values
|
||
|---|---|---|---|
| NoV TaqMan RT-PCR assay
|
Difference | ||
| This study | Study of Kageyama et al.b | ||
| Sw8 (GI.2) | 23.7 | 28.2 | 4.5 |
| Sw6 (GI.3) | 23.8 | 26.0 | 2.2 |
| Sw18 (GI.3) | 24.2 | 32.3 | 8.1 |
| Sw1 (GI.4) | 23.8 | 30.4 | 6.6 |
| Sw3 (GI.6) | 28.8 | 36.1 | 7.3 |
| B18 (GI.6) | 29.2 | 38.1 | 8.9 |
| Sw17 (GII.1) | 18.6 | 23.8 | 5.1 |
| CDC8 (GII.1) | 24.8 | 27.6 | 2.8 |
| CDC9 (GII.2) | 23.5 | 27.6 | 4.1 |
| R10 (GII.2) | 29.0 | 34.1 | 4.9 |
| S13 (GII.3) | 26.6 | 35.1 | 8.5 |
| B40 (GII.3) | 22.9 | 29.1 | 6.2 |
| R9 (GII.3) | 25.0 | 29.1 | 4.1 |
| B27 (GII.4) | 23.9 | 25.9 | 2.0 |
| Sw10 (GII.4) | 29.9 | 33.9 | 4.0 |
| B4 (GII.4) | 27.6 | 30.0 | 2.4 |
| CDC12 (GII.5) | 29.3 | 33.9 | 4.6 |
| CDC13 (GII.6) | 35.1 | 37.2 | 2.1 |
| R16 (GII.6) | 21.2 | 22.8 | 1.6 |
| CDC14 (GII.7) | 28.3 | 33.8 | 5.5 |
a
UNC, University of North Carolina at Chapel Hill.
b
See reference 12.