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. 2024 Jan 12;5(1):102826. doi: 10.1016/j.xpro.2023.102826
REAGENT or RESOURCE SOURCE IDENTIFIER
Deposited data

Aligned ribosome profiling reads This paper https://doi.org/10.5281/zenodo.8187637
https://doi.org/10.5281/zenodo.8187381
Saccharomyces cerevisiae S288C reference genome Saccharomyces Genome Database S288C reference sequence R64.2.1
Saccharomyces cerevisiae S288C reference annotation Saccharomyces Genome Database R64.2.1

Software and algorithms

iRibo This paper https://github.com/CarvunisLab/iRibo
R v4.2.2+ The R Foundation https://www.r-project.org
Samtools v1.10+ Genome Research https://www.htslib.org

Other

High performance computing cluster environment with Intel Xeon E5-2650 CPU, 64 GB memory Intel intel.com