REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Deposited data | ||
Aligned ribosome profiling reads | This paper |
https://doi.org/10.5281/zenodo.8187637 https://doi.org/10.5281/zenodo.8187381 |
Saccharomyces cerevisiae S288C reference genome | Saccharomyces Genome Database | S288C reference sequence R64.2.1 |
Saccharomyces cerevisiae S288C reference annotation | Saccharomyces Genome Database | R64.2.1 |
Software and algorithms | ||
iRibo | This paper | https://github.com/CarvunisLab/iRibo |
R v4.2.2+ | The R Foundation | https://www.r-project.org |
Samtools v1.10+ | Genome Research | https://www.htslib.org |
Other | ||
High performance computing cluster environment with Intel Xeon E5-2650 CPU, 64 GB memory | Intel | intel.com |