Table 1. Figure 1d metadata.
Donors with at least one Obelisk-alpha read from Lloyd-Price et al. 2019, with their SRA accession code, alias as used in Figure 1d, disease state, relative (to total reads per sample) Obelisk-α read abundance (see Methods), date of sampling, and original donor numeric ID.
| SRA (Lloyd-Price et al. 2019) |
alias | clinical classification |
Obelisk-alpha relative cont |
sample date | donor |
|---|---|---|---|---|---|
| SRR5949245 | donor A | Healthy Donor | 3.22E-05 | 2015-08-31 | d_2077 |
| SRR5950275 | donor A | Healthy Donor | 1.53E-04 | 2015-11-12 | d_2077 |
| SRR5950410 | donor A | Healthy Donor | 2.55E-04 | 2015-12-23 | d_2077 |
| SRR5950468 | donor A | Healthy Donor | 4.06E-04 | 2016-01-21 | d_2077 |
| SRR5950280 | donor A | Healthy Donor | 5.71E-04 | 2016-03-01 | d_2077 |
| SRR5950352 | donor A | Healthy Donor | 2.75E-05 | 2016-04-19 | d_2077 |
| SRR5950308 | donor A | Healthy Donor | 1.19E-04 | 2016-04-26 | d_2077 |
| SRR5950313 | donor A | Healthy Donor | 5.50E-05 | 2016-07-21 | d_2077 |
| SRR5950297 | donor B | Ulcerative Colitis | 1.97E-05 | 2015-11-12 | d_6038 |
| SRR5950395 | donor B | Ulcerative Colitis | 2.62E-05 | 2015-12-01 | d_6038 |
| SRR5950415 | donor B | Ulcerative Colitis | 1.21E-05 | 2016-01-05 | d_6038 |
| SRR5950446 | donor B | Ulcerative Colitis | 2.45E-05 | 2016-02-23 | d_6038 |
| SRR5950283 | donor B | Ulcerative Colitis | 6.46E-06 | 2016-03-01 | d_6038 |
| SRR5950351 | donor B | Ulcerative Colitis | 2.31E-06 | 2016-04-02 | d_6038 |
| SRR5950317 | donor B | Ulcerative Colitis | 2.18E-05 | 2016-05-23 | d_6038 |
| SRR5950257 | donor B | Ulcerative Colitis | 3.78E-05 | 2016-08-04 | d_6038 |
| SRR5949129 | donor C | Crohn's Disease | 3.61E-06 | 2015-04-28 | d_2068 |
| SRR5949216 | donor C | Crohn's Disease | 1.88E-05 | 2015-05-27 | d_2068 |
| SRR5949201 | donor C | Crohn's Disease | 2.34E-06 | 2015-07-21 | d_2068 |
| SRR5950374 | donor C | Crohn's Disease | 4.46E-06 | 2015-09-15 | d_2068 |
| SRR5950426 | donor C | Crohn's Disease | 0 | 2015-10-05 | d_2068 |
| SRR5950333 | donor C | Crohn's Disease | 1.28E-05 | 2015-12-15 | d_2068 |
| SRR5949407 | donor D | Crohn's Disease | 5.09E-06 | 2014-09-16 | d_5001 |
| SRR5949179 | donor D | Crohn's Disease | 1.37E-06 | 2014-10-29 | d_5001 |
| SRR5949326 | donor D | Crohn's Disease | 1.12E-05 | 2014-12-16 | d_5001 |
| SRR5949222 | donor E | Ulcerative Colitis | 0 | 2015-06-15 | d_2071 |
| SRR5949120 | donor E | Ulcerative Colitis | 6.33E-06 | 2015-06-26 | d_2071 |
| SRR5949586 | donor E | Ulcerative Colitis | 0 | 2015-08-19 | d_2071 |
| SRR5950375 | donor E | Ulcerative Colitis | 0 | 2015-09-16 | d_2071 |
| SRR5950383 | donor E | Ulcerative Colitis | 0 | 2016-01-19 | d_2071 |
| SRR5963925 | donor E | Ulcerative Colitis | 0 | 2016-01-27 | d_2071 |
| SRR5950464 | donor E | Ulcerative Colitis | 0 | 2016-02-02 | d_2071 |
| SRR5950281 | donor E | Ulcerative Colitis | 0 | 2016-02-29 | d_2071 |
| SRR5950429 | donor E | Ulcerative Colitis | 0 | 2016-07-06 | d_2071 |
| SRR5949469 | donor F | Crohn's Disease | 1.09E-06 | 2014-08-13 | d_2025 |
| SRR5949284 | donor F | Crohn's Disease | 0 | 2014-08-28 | d_2025 |
| SRR5949607 | donor F | Crohn's Disease | 4.24E-06 | 2014-12-23 | d_2025 |
| SRR5949267 | donor G | Ulcerative Colitis | 0 | 2015-06-23 | d_3034 |
| SRR5949148 | donor G | Ulcerative Colitis | 0 | 2015-07-08 | d_3034 |
| SRR5949435 | donor G | Ulcerative Colitis | 2.58E-06 | 2015-08-04 | d_3034 |
| SRR5950377 | donor G | Ulcerative Colitis | 0 | 2015-09-17 | d_3034 |
| SRR5950332 | donor G | Ulcerative Colitis | 0 | 2015-12-11 | d_3034 |
| SRR5950460 | donor G | Ulcerative Colitis | 0 | 2016-02-02 | d_3034 |