Table 2. Obelisk read counts from paired metagenomic (DNA) and metatranscriptomic (RNA) samples.
study | donor | mean α RNA |
sdv α RNA |
mean β RNA |
sdv β RNA |
mean RNA reads |
sdv RNA reads |
mean α DNA |
sdv α DNA |
mean β DNA |
sdv β DNA |
mean DNA reads |
sdv DNA reads |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Lloyd-Price et al. 2019 | A | 2310 | 3180 | 1 | 1 | 13372847 | 8928775 | 0 | 0 | 0 | 0 | 12434953 | 7135963 |
Lloyd-Price et al. 2019 | B | 120 | 75 | 0 | 0 | 6471339 | 1941900 | 0 | 0 | 0 | 0 | 8624205 | 2706287 |
Lloyd-Price et al. 2019 | C | 59 | 85 | 0 | 0 | 7465073 | 3571490 | 0 | 0 | 0 | 0 | 7861229 | 2987857 |
Lloyd-Price et al. 2019 | D | 35 | 36 | 0 | 0 | 5991299 | 1931426 | 0 | 0 | 0 | 0 | 11930216 | 3223559 |
Lloyd-Price et al. 2019 | E | 5 | 13 | 0 | 0 | 10205726 | 4505426 | 0 | 0 | 0 | 0 | 10182743 | 4150798 |
Lloyd-Price et al. 2019 | F | 14 | 6 | 0 | 0 | 7261820 | 2583126 | 0 | 0 | 0 | 0 | 9293180 | 3041056 |
Lloyd-Price et al. 2019 | G | 3 | 4 | 0 | 0 | 7544276 | 3692007 | 0 | 0 | 0 | 0 | 8342623 | 2564388 |
Maghini and Dvorak et al. 2023 | 1 | 8080 | 5500 | 319 | 246 | 24534988 | 11197080 | 0 | 0 | 0 | 0 | 59395503 | 52132729 |
Maghini and Dvorak et al. 2023 | 2 | 0 | 0 | 0 | 0 | 17277835 | 6182452 | 0 | 0 | 0 | 0 | 63203793 | 31663431 |
Maghini and Dvorak et al. 2023 | 3 | 0 | 0 | 0 | 0 | 14125535 | 9993287 | 0 | 0 | 0 | 0 | 35879627 | 10380606 |
Maghini and Dvorak et al. 2023 | 4 | 0 | 0 | 0 | 0 | 15983644 | 5232547 | 0 | 0 | 0 | 0 | 19114616 | 10718757 |
Maghini and Dvorak et al. 2023 | 5 | 24 | 42 | 0 | 0 | 18237767 | 5281905 | 0 | 0 | 0 | 0 | 38104238 | 18496583 |
Maghini and Dvorak et al. 2023 | 6 | 0 | 0 | 0 | 0 | 19476656 | 3667861 | 0 | 0 | 0 | 0 | 44924227 | 19547694 |
Maghini and Dvorak et al. 2023 | 7 | 0 | 0 | 0 | 0 | 18639827 | 6428812 | 0 | 0 | 0 | 0 | 75407696 | 72530680 |
Maghini and Dvorak et al. 2023 | 8 | 4 | 6 | 0 | 0 | 18449872 | 6842782 | 0 | 0 | 0 | 0 | 27950881 | 10870547 |
Maghini and Dvorak et al. 2023 | 9 | 1 | 1 | 0 | 0 | 15639556 | 9328742 | 0 | 0 | 0 | 0 | 42868581 | 32749586 |
Maghini and Dvorak et al. 2023 | 10 | 12417 | 1740 | 1 | 2 | 13021384 | 4204129 | 0 | 0 | 0 | 0 | 20243492 | 8732203 |