TABLE 3.
Top BlastX matches of genes of interest
| Putative gene name | GenBank accession no. | ORF length (aa)a | Top match(es) after BLASTX search | e value | Accession no. of similar protein |
|---|---|---|---|---|---|
| toxA | AY876053 | 656 | Exotoxin A precursor from P. aeruginosa PA01 | 2e-84 | NP_249839.1 |
| cnf | AY876054 | 846 | Cytotoxic necrotizing factor type 1 from V. fischeri | 1e-122 | JE0362 |
| Cytotoxic necrotizing factor 1 from E. coli | 3e-64 | AF483829.1 | |||
| cya | AY876055 | 1,046 | Probable inner membrane protein VC0822 from N16961 | 5e-42 | D82276 |
| 126,-000-molecular-weight pathogenicity-associated protein from V. cholerae | 5e-42 | T09441 | |||
| Adenylate cyclase ExoY from P. aeruginosa PA01 | 1e-19 | NP_250881.1 | |||
| rtx | Unknown protein from Synechocystis sp. strain PCC 6803 | 2e-31 | NP_442018.1 | ||
| Autotransporter adhesin from V. vulnificus CMCP6 | 1e-30 | NP_761533.1 | |||
| RTX protein from A. salmonicida | 3e-22 | AF218037.1 | |||
| luxA | AY876056 | Bacterial luciferase alpha chain from V. harveyi | 1e-149 | P07740 | |
| rnr | Putative VacB/RNase R from V. parahaemolyticus | 0.0 | NP_798269.1 | ||
| pSIO1 orf1 | AY876057 | 104 | No significant matches in database | ||
| pSIO1 orf2 | AY876057 | 312 | Integrase (COG0582) from Azotobacter vinelandii | 3e-72 | ZP_00091084.1 |
| Orf3 on plasmid pOM1 from Francisella tularensis | 3e-66 | NP_052245.1 | |||
| Putative integrase from Bordetella bronchiseptica | 7e-56 | NP_887463.1 | |||
| pSIO1 orf3 | AY876057 | 595 | VirD4-like protein encoded by gene on plasmid pMD136 from Pediococcus pentosaceus | 1e-19 | NP_037557.1 |
| TraG from Pseudomonas aeruginosa | 2e-13 | AAP22624 |
a
ORF, open reading frame; aa, amino acids.