Skip to main content
. 2023 Dec 7;28(49):2300637. doi: 10.2807/1560-7917.ES.2023.28.49.2300637

Table 1. Primers used for the respiratory syncytial virus RSVAB-WGS and RSVAB-GF sequencing method.

Primer Sequence (5’–3’)
Mix 1 RSVAB WGS
RSVCombinitial ACGCGAAAAAATGCGTACWACA
RSVWGS4R CATGWTGWYTTATTTGCCCC
RSVWGS2F CACTWACAATATGGGTGCC
RSVWGS1R TCCATKGTTATTTGCCCC
RSVWGS3.2F ACATGGAAAGAYATYAGCC
RSVWGS2R CRTTYCTTAARGTRGGCC
RSVWGS3.2R TTGCATCTGTAGCAGGAATGG
RSVCombending ACGAGAAAAAAAGTGTCAAAAACTAA
Mix 2 RSVAB WGS
RSVCombinitial ACGCGAAAAAATGCGTACWACA
RSVWGS1R TCCATKGTTATTTGCCCC
RSVWGS2F CACTWACAATATGGGTGCC
RSVWGS8R TCMAWYTCWGCAGCTCC
RSVWGS5R CAAACATTTAATCTRCTAAGGC
RSVWGS6F TTATAYAGATATCAYATGGGTGG
RSVWGS6R CCCTCTCCCCAATCTTTTTC
RSVCombending ACGAGAAAAAAAGTGTCAAAAACTAA
Mix RSVAB-GF
OG1-21 GGGGCAAATGCAACCATGTCC
RSVGF-R TTCGYGACATATTTGCCCC

The primers were organised by their position in the genome and the amplification mix in which they were employed. Primers RSVCombinitial, RSVWGS1R, RSVWGS2F and RSVCombending were used in both mixes.

HHS Vulnerability Disclosure