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. 2024 Jan 5;4(1):100681. doi: 10.1016/j.crmeth.2023.100681

Figure 4.

Figure 4

Representation of the Cobrawap output for one exemplary wide-field calcium imaging recording

The waves are categorized into one of 4 modes (block wave_mode_clustering), shown in columns.

(A) The average wave pattern of each mode is illustrated as a time-delay heatmap with iso-delay contours. Top: number of waves contributing to the mode.

(B) The aggregated histograms of channel-wise directions during waves of each mode. The black lines indicate the average wave-wise direction measures.

(C) Map of the average channel-wise velocities vx,y in waves of each mode (color code), overlayed (arrows) with the average channel-wise direction determined via the optical flow.

(D) The distributions of channel-wise velocities corresponding to (C). Black ticks and error bars: the average and 95% confidence interval (CI) of the corresponding wave-wise velocities.

(E) The average and 95% CI of the planarity, P, for waves of each mode.