Figure 6.

scMMT generates a high-quality low-dimensional embedding representation. (A) UMAP distribution plots of the cell type l1 level in the 160k PBMCs dataset for six methods. Cell type l1 level consists of eight different cell types, and each cell type is represented by a different color. The ARI scores are displayed in the upper-left corner, with higher values indicating superior classification performance and closer alignment with the true cell labels. (B) UMAP distribution plots display the presence of batch effects when integrating the 160k PBMCs dataset and the H1N1 dataset. Blue points represent cells from the 160k PBMCs dataset; while yellow points represent cells from the H1N1 dataset.