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. 2024 Feb 1;55:13. doi: 10.1186/s13567-024-01269-y

Table 1.

The RNA-Seq results showing average number of reads (M), aligned reads (%) and mapped reads (% assigned, multimapped, no feature (= no intersection with the bovine genome annotation) per treatment group

Group Avg. raw/trimmed reads (M reads) Avg. aligned reads (in %) Avg. assigned/multimapped/NoFeature (in %)
CTRL 0 h 77.6/77.0 70.0 52.91/14.13/9.18
CTRL 3 h 81.8/81.1 66.0 46.01/18.73/10.2
CTRL 24 h 88.7/88.0 69.0 49.62/17.93/9.71
E. coli 3 h 101.8/101.0 71.1 52.62/14.75/10.15
E. coli 24 h 82.0/81.3 71.4 52.0/18.79/9.07