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. 2005 Mar 17;6:39. doi: 10.1186/1471-2164-6-39

Table 1.

Organisms containing rpf-like genes

Part A: genes encoding proteins containing a Rpf domain
Organism Genome size (Mb) No. of genes Genome Accession Number

Corynebacterium diphtheriae 2.5 3 NC_002935
Corynebavterium glutamicum 3.3 2 NC_003450
Corynebacterium efficiens 3.1 2 NC_004369
Micrococcus luteus 2.3 1 Mukamolova et al, 1998
Mycobacterium avium 4.7 4 NC_002944
Mycobacterium bovis 4.3 5 NC_002945
Mycobacterium leprae 3.3 3 NC_002677
Mycobacterium marinum 6.5 4 NC_004506 (unfinished)
Mycobacterium smegmatis 7.0 4 NC_002974 (unfinished)
Mycobacterium tuberculosis H37Rv 4.4 5 NC_000962
Streptomyces coelicolor 8. 7 5 NC_003888
Streptomyces avermitilis 9.0 6 NC_003155

Part B: genes encoding proteins containing a domain distantly related to the Rpf domain

Bifidobacterium longum NCC2705 2.3 3 NC_004307
Tropheryma whipplei strain Twist 0.9 2 NC_004572
Streptomyces coelicolor 8. 7 2 NC_003888
Streptomyces avermitilis 9.0 3 NC_003155
Staphylococcus carnosus - 2 -
Staphylococcus aureus N315 2.8 1 NC_002745
Staphylococcus epidermidis 2.6 1 NC_004461
Oenococcus oeni 0.3 1 NZ_AABJ02000001

M. luteus and S. carnosus genomes are not yet sequenced

M. luteus genome size taken from Murayama et al. [78]