Table 1.
Part A: genes encoding proteins containing a Rpf domain | |||
Organism | Genome size (Mb) | No. of genes | Genome Accession Number |
Corynebacterium diphtheriae | 2.5 | 3 | NC_002935 |
Corynebavterium glutamicum | 3.3 | 2 | NC_003450 |
Corynebacterium efficiens | 3.1 | 2 | NC_004369 |
Micrococcus luteus | 2.3 | 1 | Mukamolova et al, 1998 |
Mycobacterium avium | 4.7 | 4 | NC_002944 |
Mycobacterium bovis | 4.3 | 5 | NC_002945 |
Mycobacterium leprae | 3.3 | 3 | NC_002677 |
Mycobacterium marinum | 6.5 | 4 | NC_004506 (unfinished) |
Mycobacterium smegmatis | 7.0 | 4 | NC_002974 (unfinished) |
Mycobacterium tuberculosis H37Rv | 4.4 | 5 | NC_000962 |
Streptomyces coelicolor | 8. 7 | 5 | NC_003888 |
Streptomyces avermitilis | 9.0 | 6 | NC_003155 |
Part B: genes encoding proteins containing a domain distantly related to the Rpf domain | |||
Bifidobacterium longum NCC2705 | 2.3 | 3 | NC_004307 |
Tropheryma whipplei strain Twist | 0.9 | 2 | NC_004572 |
Streptomyces coelicolor | 8. 7 | 2 | NC_003888 |
Streptomyces avermitilis | 9.0 | 3 | NC_003155 |
Staphylococcus carnosus | - | 2 | - |
Staphylococcus aureus N315 | 2.8 | 1 | NC_002745 |
Staphylococcus epidermidis | 2.6 | 1 | NC_004461 |
Oenococcus oeni | 0.3 | 1 | NZ_AABJ02000001 |
M. luteus and S. carnosus genomes are not yet sequenced
M. luteus genome size taken from Murayama et al. [78]