Table 2.
Single-nucleotide Variant Matrix
| Sample | C1-S4-01.4 | C1-S1-01.1 (Reference) | C1-S4-01.3 | C1-S2-01 | C2-S1-01.1 | C1-S3-01 | C2-S1-02.1 | C2-S2-02.1 | C2-S2-01.1 | C2-S3-01.1 | C2-S3-02.3 | C2-S3-02.1 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C1-S4-01.4 | 0 | 23 | 7 | 4 | 16 | 4 | 15 | 14 | 13 | 13 | 13 | 13 |
| C1-S1-01.1 (Reference) | 23 | 0 | 22 | 19 | 19 | 19 | 18 | 17 | 16 | 16 | 16 | 16 |
| C1-S4-01.3 | 7 | 22 | 0 | 3 | 15 | 3 | 14 | 13 | 12 | 12 | 12 | 12 |
| C1-S2-01 | 4 | 19 | 3 | 0 | 12 | 0 | 11 | 10 | 9 | 9 | 9 | 9 |
| C2-S1-01.1 | 16 | 19 | 15 | 12 | 0 | 12 | 3 | 2 | 3 | 3 | 3 | 3 |
| C1-S3-01.1 | 4 | 19 | 3 | 0 | 12 | 0 | 11 | 10 | 9 | 9 | 9 | 9 |
| C2-S1-02.1 | 15 | 18 | 14 | 11 | 3 | 11 | 0 | 1 | 2 | 2 | 2 | 2 |
| C2-S2-02.1 | 14 | 17 | 13 | 10 | 2 | 10 | 1 | 0 | 1 | 1 | 1 | 1 |
| C2-S2-01.1 | 13 | 16 | 12 | 9 | 3 | 9 | 2 | 1 | 0 | 0 | 0 | 0 |
| C2-S3-01.1 | 13 | 16 | 12 | 9 | 3 | 9 | 2 | 1 | 0 | 0 | 0 | 0 |
| C2-S3-02.3 | 13 | 16 | 12 | 9 | 3 | 9 | 2 | 1 | 0 | 0 | 0 | 0 |
| C2-S3-02.1 | 13 | 16 | 12 | 9 | 3 | 9 | 2 | 1 | 0 | 0 | 0 | 0 |