Skip to main content
. 2024 Jan 23;27(2):108992. doi: 10.1016/j.isci.2024.108992
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Mouse monoclonal anti-α-actinin Sigma-Aldrich Cat#A7811; RRID: AB_476766
Mouse monoclonal anti-troponin T2 (TnT2) Santa Cruz Biotechnology Cat#SC-20025; RRID: AB_628403
Rabbit polyclonal anti-connexin 43 Sigma-Aldrich Cat#C6219; AB_476857
Mouse monoclonal anti-β-MHC Santa Cruz Biotechnology Cat#SC-53089; RRID: AB_2147281
Alexa Fluor 488 anti-mouse IgG Jackson Immuno Research Cat#715-546-150; RRID: AB_2340849
Alexa Fluor 594 anti-mouse IgG Jackson Immuno Research Cat#715-586-150; RRID: AB_2340857
DyLight-594 anti-mouse IgM Jackson Immuno Research Cat#715-516-020; RRID: AB_2340843
Alexa Fluor 647 anti-rabbit IgG ThermoFisher Cat#A21245; RRID: AB_2535813
Alexa Fluor 488 anti-rabbit IgG ThermoFisher Cat#A21206; RRID: AB_2535792
mouse monoclonal IgG (isotype) Santa cruz Cat#sc-2025; RRID: AB_737182

Chemicals, peptides, and recombinant proteins

4′,6-Diamidino-2-phenylindole, dihydrochloride (DAPI) Wako Pure Chemical Industries, Ltd. Cat#342-07431
Primate embryonic stem cell medium ReproCELL Cat#RCHEMD001
Human basic fibroblast growth factor (bFGF) ReproCELL Cat#RCHEOT002
Mitomycin C Wako Pure Chemical Industries, Ltd. Cat#139-18711
AccumaxTM Nacalai Tesque Cat#17087-54
StemPro-34 medium Thermo Fisher Scientific Cat#10640-019
Ascorbic acid FUJIFILM Wako Pure Chemical Corporation Cat#012-04802
1-thioglycerol Sigma-Aldrich Cat#M1753-100ML
Bone morphologic protein 4 R&D Systems Cat#314-BP-010/CF
Activin A R&D Systems Cat#338-AC-010/CF
Vascular endothelial growth factor (VEGF) FUJIFILM Wako Pure Chemical Corporation Cat#229-01313
IWR-1 Sigma-Aldrich Cat#I0161-5MG
IWP-2 Sigma-Aldrich Cat#686770-61-6
Dulbecco’s modified Eagle’s medium (DMEM) Nacalai Tesque Cat#08458-45
Dulbecco’s Modified Eagle’s Medium (DMEM)-high glucose Sigma-Aldrich Cat#D5796
Iscove’s Modified Dulbecco’s Medium (IMDM) Sigma-Aldrich Cat#I3390
Fetal bovine serum (FBS) Biosera Cat#FB-1280/500
iMatrix-511Silk MATRIXOME Cat#387-10131
PDMS Dow Corning SYLGARD 184
D-PBS TaKaRa Cat#T900
Y-27632 Nacalai Tesque Cat#034-24024
non-essential amino acid solution Sigma-Aldrich Cat#M7145
penicillin-streptomycin Gibco Cat#15140-122
L-glutamine Gibco Cat#ref. 25030-081
0.25% Trypsin-EDTA Gibco Cat#25200-072
Seahorse XF DMEM Medium, pH7.4 Agilent Cat#103575-100
Seahorse XF 1.0M Glucose Solution Agilent Cat#103677-100
Triton X-100 Nacalai Tesque Cat#9002-93-1
Tween 20 Nacalai Tesque Cat#28353-14
iCell Cardiomyocytes Plating Medium Fujifilm Cat#M1001
iCell Cardiomyocytes Maintenance Medium Fujifilm Cat#M1003
Trizol Reagent Invitrogen Cat#108-95-2
E−4031 Sigma-Aldrich Cat#M5060
Aspirin Sigma-Aldrich Cat#1044006
Ranolazine Sigma-Aldrich Cat#1598744
Mexiletin Abcam Cat#ab141823
Isoproterenol Sigma-Aldrich Cat#I5627
Metroprolol Sigma-Aldrich Cat#M5391
Verapamil Sigma-Aldrich Cat#V4629
Propranolol Sigma-Aldrich Cat#P0884
Dobutamine Sigma-Aldrich Cat#D0676
Milrinon Wako Cat#1504/10

Experimental models: Cell lines

iCell2 Cellular Dynamics International (CDI) Lot105451
Human Ventricular Cardiac Fibroblasts Lonza Cat#CC-2904
253G1 iPSC Riken HPS0002
Mouse embryonic fibroblast cells ReproCELL RCHEFC003

Software and algorithms

FlowJo software Treestar Inc. N/A
Fiji: ImageJ Fiji https://fiji.sc/
MATLAB R2020 MathWorks N/A
Origin2019 OriginLab N/A
iDEP Ge et al.69 http://bioinformatics.sdstate.edu/idep/
Metascape Zhou et al.70 http://metascape.org/
EC50/IC50 value calculator AAT Bioquest, Inc. www.aatbio.com/tools/ic50-calculator

Deposited data

TW and Control group data This paper GSE251914
Fetal and adult heart data Kohjitani et al.60 GSE137255

Critical commercial assays

Seahorse XF Cell Mito Stress Test Kit Agilent Technologies 103015–100

Others

Confocal microscope Nikon NIKON A1
Cell Motion Imaging System SONY SI8000
FACS Canto II flow cytometer BD Biosciences N/A
Transmission electron microscope Hitachi Co. H-7650
Extracellular flux analyzer Agilent Technologies Seahorse XFe 96
MEA data system Multi Channel Systems USB-ME64-System