Table 8.
Differentially expressed pathways in T cell subsets.
| CL | pathway | NES |
|---|---|---|
| 0 | WP_CYTOPLASMIC_RIBOSOMAL_PROTEINS | 3.2 |
| 0 | GOBP_CYTOPLASMIC_TRANSLATION | 2.99 |
| 0 | BILANGES_SERUM_AND_RAPAMYCIN_SENSITIVE_GENES | 2.97 |
| 0 | GOCC_CYTOSOLIC_RIBOSOME | 2.9 |
| 0 | GOMF_RRNA_BINDING | 2.86 |
| 0 | REACTOME_NONSENSE_MEDIATED_DECAY_NMD_INDEPENDENT_OF_THE_EXON_JUNCTION_COMPLEX_EJC | 2.81 |
| 0 | REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE | 2.8 |
| 0 | REACTOME_EUKARYOTIC_TRANSLATION_INITIATION | 2.75 |
| 0 | REACTOME_FORMATION_OF_A_POOL_OF_FREE_40S_SUBUNITS | 2.75 |
| 0 | REACTOME_NONSENSE_MEDIATED_DECAY_NMD | 2.74 |
| 0 | REACTOME_MAJOR_PATHWAY_OF_RRNA_PROCESSING_IN_THE_NUCLEOLUS_AND_CYTOSOL | 2.66 |
| 0 | TABULA_MURIS_SENIS_HEART_AND_AORTA_LEUKOCYTE_AGEING | 2.63 |
| 0 | BILANGES_SERUM_RESPONSE_TRANSLATION | 2.58 |
| 0 | GOMF_STRUCTURAL_CONSTITUENT_OF_RIBOSOME | 2.53 |
| 0 | GOBP_RIBOSOME_ASSEMBLY | 2.46 |
| 0 | TABULA_MURIS_SENIS_KIDNEY_FIBROBLAST_AGEING | 2.45 |
| 0 | GOCC_RIBOSOMAL_SUBUNIT | 2.45 |
| 0 | GOCC_RIBOSOME | 2.45 |
| 0 | GOBP_CYTOPLASMIC_PATTERN_RECOGNITION_RECEPTOR_SIGNALING_PATHWAY | 2.38 |
| 0 | TABULA_MURIS_SENIS_BLADDER_BLADDER_CELL_AGEING | 2.35 |
| 1 | GOCC_CYTOSOLIC_RIBOSOME | 3.53 |
| 1 | WP_CYTOPLASMIC_RIBOSOMAL_PROTEINS | 3.44 |
| 1 | GOCC_CYTOSOLIC_LARGE_RIBOSOMAL_SUBUNIT | 3.35 |
| 1 | REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE | 3.35 |
| 1 | REACTOME_FORMATION_OF_A_POOL_OF_FREE_40S_SUBUNITS | 3.26 |
| 1 | REACTOME_NONSENSE_MEDIATED_DECAY_NMD_INDEPENDENT_OF_THE_EXON_JUNCTION_COMPLEX_EJC | 3.24 |
| 1 | GOMF_STRUCTURAL_CONSTITUENT_OF_RIBOSOME | 3.1 |
| 1 | REACTOME_EUKARYOTIC_TRANSLATION_INITIATION | 3.09 |
| 1 | GOCC_RIBOSOMAL_SUBUNIT | 3.03 |
| 1 | REACTOME_NONSENSE_MEDIATED_DECAY_NMD | 3.02 |
| 1 | GOMF_STRUCTURAL_MOLECULE_ACTIVITY | 3 |
| 1 | GOCC_CYTOSOLIC_SMALL_RIBOSOMAL_SUBUNIT | 2.95 |
| 1 | REACTOME_MAJOR_PATHWAY_OF_RRNA_PROCESSING_IN_THE_NUCLEOLUS_AND_CYTOSOL | 2.84 |
| 1 | GOBP_CYTOPLASMIC_TRANSLATION | 2.81 |
| 1 | GOCC_RIBOSOME | 2.81 |
| 1 | GOCC_ACTIN_FILAMENT_BUNDLE | 2.8 |
| 1 | GOCC_LARGE_RIBOSOMAL_SUBUNIT | 2.75 |
| 1 | TABULA_MURIS_SENIS_DIAPHRAGM_SKELETAL_MUSCLE_SATELLITE_CELL_AGEING | 2.7 |
| 1 | GOCC_SMALL_RIBOSOMAL_SUBUNIT | 2.68 |
| 1 | HSF2_TARGET_GENES | 2.65 |
| 2 | TABULA_MURIS_SENIS_MAMMARY_GLAND_T_CELL_AGEING | 3.05 |
| 2 | TABULA_MURIS_SENIS_LUNG_CD4_POSITIVE_ALPHA_BETA_T_CELL_AGEING | 2.92 |
| 2 | TABULA_MURIS_SENIS_SPLEEN_CD8_POSITIVE_ALPHA_BETA_T_CELL_AGEING | 2.79 |
| 2 | TABULA_MURIS_SENIS_LUNG_CD8_POSITIVE_ALPHA_BETA_T_CELL_AGEING | 2.68 |
| 2 | TABULA_MURIS_SENIS_MAMMARY_GLAND_B_CELL_AGEING | 2.67 |
| 2 | TABULA_MURIS_SENIS_MAMMARY_GLAND_MACROPHAGE_AGEING | 2.65 |
| 2 | TABULA_MURIS_SENIS_BROWN_ADIPOSE_TISSUE_T_CELL_AGEING | 2.65 |
| 2 | LI_INDUCED_T_TO_NATURAL_KILLER_UP | 2.61 |
| 2 | TABULA_MURIS_SENIS_SPLEEN_T_CELL_AGEING | 2.6 |
| 2 | TABULA_MURIS_SENIS_MARROW_HEMATOPOIETIC_PRECURSOR_CELL_AGEING | 2.55 |
| 2 | TABULA_MURIS_SENIS_LUNG_B_CELL_AGEING | 2.51 |
| 2 | TABULA_MURIS_SENIS_THYMUS_DN4_THYMOCYTE_AGEING | 2.49 |
| 2 | TABULA_MURIS_SENIS_SUBCUTANEOUS_ADIPOSE_TISSUE_B_CELL_AGEING | 2.45 |
| 2 | TABULA_MURIS_SENIS_KIDNEY_MACROPHAGE_AGEING | 2.45 |
| 2 | TABULA_MURIS_SENIS_KIDNEY_T_CELL_AGEING | 2.45 |
| 2 | TABULA_MURIS_SENIS_GONADAL_ADIPOSE_TISSUE_B_CELL_AGEING | 2.45 |
| 2 | GOBP_NATURAL_KILLER_CELL_ACTIVATION | 2.44 |
| 2 | GOLDRATH_ANTIGEN_RESPONSE | 2.44 |
| 2 | GOCC_COLLAGEN_CONTAINING_EXTRACELLULAR_MATRIX | 2.41 |
| 2 | GOCC_EXTERNAL_ENCAPSULATING_STRUCTURE | 2.4 |
| 3 | GOCC_CYTOSOLIC_RIBOSOME | 3.62 |
| 3 | WP_CYTOPLASMIC_RIBOSOMAL_PROTEINS | 3.58 |
| 3 | GOMF_STRUCTURAL_CONSTITUENT_OF_RIBOSOME | 3.56 |
| 3 | GOCC_RIBOSOMAL_SUBUNIT | 3.47 |
| 3 | GOCC_RIBOSOME | 3.45 |
| 3 | GOMF_STRUCTURAL_MOLECULE_ACTIVITY | 3.44 |
| 3 | REACTOME_FORMATION_OF_A_POOL_OF_FREE_40S_SUBUNITS | 3.44 |
| 3 | REACTOME_NONSENSE_MEDIATED_DECAY_NMD_INDEPENDENT_OF_THE_EXON_JUNCTION_COMPLEX_EJC | 3.39 |
| 3 | REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE | 3.38 |
| 3 | REACTOME_MAJOR_PATHWAY_OF_RRNA_PROCESSING_IN_THE_NUCLEOLUS_AND_CYTOSOL | 3.38 |
| 3 | REACTOME_EUKARYOTIC_TRANSLATION_INITIATION | 3.37 |
| 3 | GOBP_CYTOPLASMIC_TRANSLATION | 3.31 |
| 3 | REACTOME_TRANSLATION | 3.31 |
| 3 | GOCC_CYTOSOLIC_LARGE_RIBOSOMAL_SUBUNIT | 3.3 |
| 3 | REACTOME_NONSENSE_MEDIATED_DECAY_NMD | 3.28 |
| 3 | GOCC_LARGE_RIBOSOMAL_SUBUNIT | 3.26 |
| 3 | BILANGES_SERUM_AND_RAPAMYCIN_SENSITIVE_GENES | 3.01 |
| 3 | GOCC_CYTOSOLIC_SMALL_RIBOSOMAL_SUBUNIT | 2.83 |
| 3 | GOCC_POLYSOMAL_RIBOSOME | 2.82 |
| 3 | GOCC_SMALL_RIBOSOMAL_SUBUNIT | 2.81 |
| 4 | GROSS_HYPOXIA_VIA_ELK3_DN | 2.82 |
| 4 | RASHI_RESPONSE_TO_IONIZING_RADIATION_2 | 2.66 |
| 4 | TABULA_MURIS_SENIS_MARROW_GRANULOCYTOPOIETIC_CELL_AGEING | 2.64 |
| 4 | LIAN_LIPA_TARGETS_6M | 2.59 |
| 4 | LIAN_LIPA_TARGETS_3M | 2.58 |
| 4 | TABULA_MURIS_SENIS_PANCREAS_PANCREATIC_BETA_CELL_AGEING | 2.57 |
| 4 | HALLMARK_TNFA_SIGNALING_VIA_NFKB | 2.56 |
| 4 | GERY_CEBP_TARGETS | 2.55 |
| 4 | HESS_TARGETS_OF_HOXA9_AND_MEIS1_DN | 2.52 |
| 4 | TABULA_MURIS_SENIS_SPLEEN_MACROPHAGE_AGEING | 2.51 |
| 4 | GOBP_INFLAMMATORY_RESPONSE | 2.5 |
| 4 | GOBP_RESPONSE_TO_MOLECULE_OF_BACTERIAL_ORIGIN | 2.49 |
| 4 | TABULA_MURIS_SENIS_MAMMARY_GLAND_BASAL_CELL_AGEING | 2.49 |
| 4 | GALINDO_IMMUNE_RESPONSE_TO_ENTEROTOXIN | 2.49 |
| 4 | TABULA_MURIS_SENIS_SUBCUTANEOUS_ADIPOSE_TISSUE_MYELOID_CELL_AGEING | 2.48 |
| 4 | SEKI_INFLAMMATORY_RESPONSE_LPS_UP | 2.48 |
| 4 | CHYLA_CBFA2T3_TARGETS_DN | 2.47 |
| 4 | MIR_467A_3P | 2.47 |
| 4 | MIR_669B_3P | 2.45 |
| 4 | MIR_669F_3P | 2.45 |
| 5 | HOFFMANN_SMALL_PRE_BII_TO_IMMATURE_B_LYMPHOCYTE_UP | 3.02 |
| 5 | GOBP_B_CELL_ACTIVATION | 3 |
| 5 | GOBP_B_CELL_RECEPTOR_SIGNALING_PATHWAY | 2.98 |
| 5 | GOBP_B_CELL_MEDIATED_IMMUNITY | 2.96 |
| 5 | MORI_MATURE_B_LYMPHOCYTE_UP | 2.92 |
| 5 | MORI_LARGE_PRE_BII_LYMPHOCYTE_DN | 2.92 |
| 5 | GOBP_B_CELL_DIFFERENTIATION | 2.91 |
| 5 | YU_MYC_TARGETS_DN | 2.89 |
| 5 | GOBP_REGULATION_OF_B_CELL_ACTIVATION | 2.89 |
| 5 | TABULA_MURIS_SENIS_KIDNEY_FENESTRATED_CELL_AGEING | 2.89 |
| 5 | TABULA_MURIS_SENIS_LUNG_NON_CLASSICAL_MONOCYTE_AGEING | 2.87 |
| 5 | GOBP_REGULATION_OF_B_CELL_PROLIFERATION | 2.86 |
| 5 | GOBP_B_CELL_PROLIFERATION | 2.84 |
| 5 | MORI_IMMATURE_B_LYMPHOCYTE_UP | 2.77 |
| 5 | GOBP_ANTIGEN_PROCESSING_AND_PRESENTATION_OF_EXOGENOUS_ANTIGEN | 2.76 |
| 5 | GOBP_ANTIGEN_PROCESSING_AND_PRESENTATION_OF_PEPTIDE_ANTIGEN | 2.76 |
| 5 | GOBP_ANTIGEN_PROCESSING_AND_PRESENTATION | 2.76 |
| 5 | GOBP_ANTIGEN_PROCESSING_AND_PRESENTATION_OF_EXOGENOUS_PEPTIDE_ANTIGEN | 2.75 |
| 5 | GOBP_ANTIGEN_PROCESSING_AND_PRESENTATION_OF_PEPTIDE_OR_POLYSACCHARIDE_ANTIGEN_VIA_MHC_CLASS_II | 2.73 |
| 5 | TABULA_MURIS_SENIS_THYMUS_PROFESSIONAL_ANTIGEN_PRESENTING_CELL_AGEING | 2.72 |
CL, cluster; NES, normalized enrichment score.