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. 2024 Feb 9;13:e86478. doi: 10.7554/eLife.86478

Appendix 1—key resources table.

Reagent type (species) or resource Designation Source or reference Identifiers Additional information
Strain, strain background (Escherichia coli) Caenorhabditis Genetics Centre Wormbase, E. coli OP50 WBStrain00041969 Other names:
CBb1
Recombinant DNA reagent Source Bioscience Vidal and Ahringer RNAi Libraries in HT115 (D3) E. coli RNAi Library
Chemical compound, drug L-methionine Fisher Scientific Cat#: AC166160025 CAS: 63-68-3
Chemical compound, drug L-Cystathionine Sigma Cat#: C7505-10MG
Chemical compound, drug L-Methionine Sigma Cat#: M-9625
Chemical compound, drug L-Serine Sigma Cat#: S-4500
Chemical compound, drug Choline Chloride Millipore Sigma Cat#: C7017-5G, CAS:67-48-1
Chemical compound, drug Sodium Chloride (NaCl) Fisher Bioreagents Cat#: BP358-1 CAS:7647-14-5
Chemical compound, drug β-meracaptoethanol Fisher Scientific Cat#: AC125470100 CAS: 60-24-2
Chemical compound, drug Trizol ThermoFisher Scientific Cat#: 15596018
Chemical compound, drug PowerUp SYBR Green Master Mix Applied Biosystems Cat#: A25741
Chemical compound, drug Agarose Fisher Bioreagents Cat#: BP160-500, CAS: 9012-36-6
Chemical compound, drug Pronase Sigma- Aldrich SKU# 10165921001
Chemical compound, drug DMSO (Dimethyl Sulfoxide) ThermoFisher Scientific Cat#: 85190, Cas:67-68-5
Chemical compound, drug Water, Molecular Grade, Sterile, DEPC Free Fisher Scientific CAS: 7732-18-5 Cat#: R91450001G,
Chemical compound, drug NCT502 MedChemExpress (MCE) Cat#: HY-117240
Chemical compound, drug Polybead polystyrene Polysciences Cat#08691–10
Commercial assay or kit  ATP Assay Kit (Colorometric/ Fluorometric) Abcam Ab83355
Commercial assay or kit Pyrophosphate Assay Kit (Fluorometric) Abcam Ab112155
Commercial assay or kit Pyruvate Kinase (PK) Assay Kit (Colorimetric) Abcam Ab83432
Commercial assay or kit BCA Protein Quantification Kit Abcam Ab102536
Commercial assay or kit  RNAeasy columns QIAGEN Cat#74034
Commercial assay or kit Direct-zol RNA Miniprep Plus Kit Zymo Research Cat# R2070
Strain, strain background (C. elegans) SK4005 Taub et. al. WT (zdis5 pmec-4::GFP)
Strain, strain background (C. elegans) NA Taub et. al. ogt-1(ok1474)_zdis-5 pmec-4::GFP
Strain, strain background (C. elegans) OG1135 This study Ogt-1 (OG1135)_TU3568_ pmec-4::GFP
Strain, strain background (C. elegans) RB1342 Taub et. al. ogt-1(ok1474)
Strain, strain background (C. elegans) NA Taub et. al. TU3568 (sid-1(pk3321) him-5(e1490) V; lin-15B(n744) X; uIs71[(pCFJ90) pmyo-2::mCherry +pmec-18::sid-1])
Strain, strain background (C. elegans) NA Taub et. al. ogt-1(ok1474)_TU3568
Strain, strain background (C. elegans) RB2240 CGC sams-1(ok3033)
Strain, strain background (C. elegans) NA in this study sams-1_zdis-5
Strain, strain background (C. elegans) NA in this study ogt-1;sams-1_zdis-5
Strain, strain background (C. elegans) RB755 CGC metr-1(R03D7.1(ok521))
Strain, strain background (C. elegans) NA in this study metr-1_zdis-5
Strain, strain background (C. elegans) NA in this study ogt-1;metr-1_zdis-5
Strain, strain background (C. elegans) VC1011 CGC acdh-1(ok1489)
Strain, strain background (C. elegans) NA in this study acdh-1_zdis-5
Strain, strain background (C. elegans) NA in this study ogt-1;acdh-1_zdis-5
Strain, strain background (C. elegans) RB512 CGC mce-1(D2030.5(ok243))
Strain, strain background (C. elegans) NA in this study mce-1_zdis-5
Strain, strain background (C. elegans) NA in this study mce-1_TU3568_zdis-5
Strain, strain background (C. elegans) NA in this study ogt-1;mce-1_TU3568_zdis-5
Strain, strain background (C. elegans) CG122 Taub et. al. ogt-1;akt-1(mg144)
Strain, strain background (C. elegans) CG125 Taub et. al. ogt-1;akt-1(ok525)
Strain, strain background (C. elegans) MS2495 Soto and Rivera et. al. irIs158 (normal ATP sensor, CAmA)
Strain, strain background (C. elegans) NA In this study ogt-1; CAmA
Sequence-based reagent folr-1_F C17G1.1 RT-qPCR GGCTTCCATTGCCGTCATAA
Sequence-based reagent folr-1_R C17G1.1 RT-qPCR GCTAACCACTGGCTCACGAT
Sequence-based reagent metr-1_F R03D7.1 RT-qPCR CCCGAATCGCAGTTATCCGA
Sequence-based reagent metr-1_R R03D7.1 RT-qPCR GAAGCAGCTGGGAGGAATGA
Sequence-based reagent sams-1_F C49F5.1 RT-qPCR CACTCACCGACGAAGAGCTT
Sequence-based reagent sams-1_R C49F5.1 RT-qPCR GTGACCGAAGTGACCGTTCT
Sequence-based reagent dmat-1_F C18A3.1 RT-qPCR ATTGCCGATCCACCATGGTT
Sequence-based reagent dmat-1_R C18A3.1 RT-qPCR CCGATTTGTGATCCAGAAAGCA
Sequence-based reagent nmad-1_F F09F7.7 RT-qPCR GCACAGTCACAAAGTGGTCG
Sequence-based reagent nmad-1_R F09F7.7 RT-qPCR CGTACTCTGGCATTCCGACA
Sequence-based reagent cth-1_F F22B8.6 RT-qPCR TCTGATATTATTATGGGAGCCGC
Sequence-based reagent cth-1_R F22B8.6 RT-qPCR TGCAGTCATGAGCTTCAAGGA
Sequence-based reagent cth-2_F ZK1127.10 RT-qPCR TTGGAGCGGATGTTGTCGTT
Sequence-based reagent cth-2_R ZK1127.10 RT-qPCR AGTGAGCTCTCATTCTGATGTGA
Sequence-based reagent pcca-1_F F27D9.5 RT-qPCR AAATGGGAGAACAGGCCGTT
Sequence-based reagent pcca-1_R F27D9.5 RT-qPCR TGGGTGATTGGAAGTGGGTG
Sequence-based reagent pccb-1_F F52E4.1 RT-qPCR AAAGTTTGCTGCTGGATGCC
Sequence-based reagent pccb-1_R F52E4.1 RT-qPCR AATCTTTGGAACGGTGGCCT
Sequence-based reagent mce-1_F D2030.5 RT-qPCR TGTCCACAAGAACCATGGCT
Sequence-based reagent mce-1_R D2030.5 RT-qPCR CGCCGAATGGATGAAGAAGC
Sequence-based reagent mmcm-1_F ZK1058.1 RT-qPCR CAATGTTGCCGATCCTTGGG
Sequence-based reagent mmcm-1_R ZK1058.1 RT-qPCR TCCAACAATCACATCTTTTCCAGC
Sequence-based reagent acdh-1_F C55B7.4 RT-qPCR TCCGAGCTTCATCCACTTGT
Sequence-based reagent acdh-1_R C55B7.4 RT-qPCR CTGACCGAACTGTTCTCTCTGT
Sequence-based reagent ech-6_F T05G5.6 RT-qPCR AGGTGGAAACGAGTTGGCAA
Sequence-based reagent ech-6_R T05G5.6 RT-qPCR GCTCACAATACCGTGCTCCT
Sequence-based reagent hach-1_F F09F7.4 RT-qPCR AGTCATCAGATCGTTCGAGCC
Sequence-based reagent hach-1_R F09F7.4 RT-qPCR TCGGTGATTTGTCGGTGAGT
Sequence-based reagent hphd-1_F Y38F1A.6 RT-qPCR CAAAGATCTCCACGCCCTGA
Sequence-based reagent hphd-1_R Y38F1A.6 RT-qPCR GGAGAGTCCGTGGCAAAGAT
Sequence-based reagent alh-8_F F13D12.4 RT-qPCR GGGAGCTCAGGTTCCACTTG
Sequence-based reagent alh-8_R F13D12.4 RT-qPCR TGAAGATGGCCGTTCCGTTT
Sequence-based reagent act-1_F T04C12.6 RT-qPCR TCGGTATGGGACAGAAGGAC
Sequence-based reagent act-1_R T04C12.6 RT-qPCR CATCCCAGTTGGTGACGATA