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. 2023 Nov 2;12(11):3205–3214. doi: 10.1021/acssynbio.3c00154

Table 4. Performance of the Nucleic Transformer across Human and Mouse Species Compared to Previous Results.

organism model accuracy precision recall F1 MCC
human TATA DeePromoter 0.9732 0.943 0.9785 0.9604 0.94
  Nucleic Transformer 0.9775 0.9621 0.9706 0.9663 0.9494
human non-TATA DeePromoter 0.8373 0.8575 0.9592 0.9055 0.363
  Nucleic Transformer 0.8829 0.9064 0.9544 0.9298 0.585
mouse TATA DeePromoter 0.9751 0.9513 0.9779 0.9644 0.9456
  Nucleic Transformer 0.9776 0.958 0.9779 0.9678 0.9508
mouse non-TATA DeePromoter 0.8342 0.8518 0.954 0.9 0.4497
  Nucleic Transformer 0.9015 0.9271 0.9487 0.9378 0.7037