Table 2.
Primers used in this study
|
Primers |
Sequence (5′−3′) |
Purpose |
Reference |
|---|---|---|---|
|
SXTint-F |
GCTGGATAGGTTAAGGGCGG |
PCR and sequencing |
[49] |
|
SXTint-R |
CTCTATGGGCACTGTCCACATTG |
PCR and sequencing |
[49] |
|
FloRfl-F |
CGGAATTCCCATCCTGCGGGAGCG |
PCR, cloning and sequencing |
This study |
|
FloRfl-R |
AACTGCAGTCCAGCGCTTTCACAC |
PCR, cloning and sequencing |
This study |
|
FloR-F |
CCGGAATTCGTCATGACCACCACACGC |
Cloning and sequencing |
This study |
|
FloRNΔ29-F |
CCGGAATTCGCGATGGATATTTATCTCCCTG |
Cloning and sequencing |
This study |
|
FloRCΔ36-R |
AAAACTGCAGCTAGTCACCGTTTAAAAGTG |
Cloning and sequencing |
This study |
|
PBAD-F |
TCGCTAACCAAACCGGTAAC |
Sequencing |
[47] |
|
PBAD-R |
GATGCCTGGCAGTTCCCTAC |
Sequencing |
[47] |
|
SXTjun-F |
ATAAAGTCAAGATCAGCGAAAAT |
PCR and sequencing |
This study |
|
Prfcint-R |
AGAGTCAACTGCGGTCAGAG |
PCR and sequencing |
[49] |
|
FloRcΔ12-R |
AAAACTGCAGCTACCGAAGGAGCACCAGCCCC |
Cloning and sequencing |
This study |
|
FloRnΔ4-F |
CCGGAATTCACCATGCGCCCCGCGTGGGCCTATAC |
Cloning and sequencing |
This study |
|
FloRP1-F |
CCGGAATTCGTAGCAATTCATATTC |
Cloning and sequencing |
This study |
|
FloRP2-F |
CCGGAATTCTCATCTGATTGCTGACG |
Cloning and sequencing |
This study |
|
SXTstrA-F |
GCGTGACCGCCTCATTTGG |
PCR |
This study |
|
SXTstrA-R |
CCCGTGCATTGAAGAGTTTTAG |
PCR |
This study |
|
SXTstrB- F |
ATGTTGCTCGAATATGCCGG |
PCR |
This study |
|
SXTstrB- R |
GCCGGATCGTAGAACATATTGG |
PCR |
This study |
|
SIint-F |
ACATCCATTTTCATAAT |
PCR |
This study |
|
SIint-R |
GTGCATTTGGATACTTT |
PCR |
This study |
|
SIjun-F1 |
ATTAAAGCTGGTCAATAC |
PCR |
This study |
|
SIjun-R1 |
GAAGCTTACCTTCATTGGAT |
PCR |
This study |
|
SIjun-F2 |
ATACAAAAAAGCTTCAGTTC |
PCR |
This study |
|
SIjun-R2 |
GCTGCGCTGCTTCTAACT |
PCR |
This study |
|
StrAB-F |
CCGGAATTCCCATTGAATCGAACT |
Cloning and sequencing |
This study |
|
StrAB-R |
AAAACTGCAGGTCGCTTG |
Cloning and sequencing |
This study |
|
StrA-R1 |
AAAACTGCAGGAACATCAACCCCAAGT |
Cloning and sequencing |
This study |
|
StrB-F1 |
CCGGAATTCTTGATGTTCATGCCG |
Cloning and sequencing |
This study |
|
StrA-F2 |
ATTGCTAACGCCGAAGAG |
RT-PCR |
This study |
|
StrB-R2 |
CCGCGCAGTTCATCAGCAAT |
RT-PCR |
This study |
|
StrAcΔ6-R |
AAAACTGCAGCTACAATCGCAGATAGAAGG |
Cloning and sequencing |
This study |
|
StrAnΔ27-F |
CCGGAATTCGTTATGTTTCGACGTGGTGACG |
Cloning and sequencing |
This study |
|
FloRrtm-F |
TGTCGCGGTCGGTATTGTC |
qRT-PCR |
This study |
|
FloRrtm-R |
CGTCGAACTCTGCCAAAGC |
qRT-PCR |
This study |
|
StrArtm-F |
GGGCAGCGCCAGATGA |
qRT-PCR |
This study |
|
StrArtm-R |
GCTTCGATCCCCAATACATTG |
qRT-PCR |
This study |
|
M13-F |
GTAAAACGACGGCCAGT |
Sequencing |
NEB |
|
M13-R |
AACAGCTATGACCATG |
Sequencing |
NEB |
|
recA-F |
GCAATTTGGTAAAGGCTCCA |
qRT-PCR |
[27] |
|
recA-R |
GTTGTGCAGCAGCAATCAGT |
qRT-PCR |
[27] |