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. Author manuscript; available in PMC: 2024 Feb 16.
Published in final edited form as: Biochem J. 2023 Nov 15;480(21):1733–1751. doi: 10.1042/BCJ20230281

Table 1.

Stability of active conformation in MEK1 variants reported through differences in computed free energies between states: active–inactive; active–stable; inactive–stable

In order of least active to most active systems (reorder this) Δ Free energy (kcal/mol) Conformation most stabilized
KE salt bridge: DFG flip: A-loop
(Inactive = 0, Active = 1, anything intermediate = 0.5)
Active-inactive Active-stable Inactive-stable
WT 12.85 12.85 0 [0:0:0]
SSDD 7.91 10.58 2.67 [0:0.5:0]
DP MEK 4.94 8.15 3.21 [0:0:0.5]
F53S 1.65 11.93 10.28 [0.5:0.5:0.5]
−10.28 0 10.28 (if the most stable zone is kinase active)
E203K 1.05 2.53 1.48 [0.5:0.5:1]
−1.48 0 1.48 (if the most stable zone is kinase active)

The third column lists the status of the [KE salt bridge: DFG flip: A-loop], each showing either Inactive = 0, Active = 1, or intermediate = 0.5 characteristics.