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. Author manuscript; available in PMC: 2024 Dec 4.
Published in final edited form as: Dev Cell. 2023 Oct 23;58(23):2666–2683.e9. doi: 10.1016/j.devcel.2023.10.002

KEY RESOURCES TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
Rabbit polyclonal anti-APC7 C-term Bethyl Cat# A302-551A, RRID:AB_1998911
Rabbit anti-APC1 Bethyl Cat# A301-653A-T, RRID:AB_2632162
Mouse monoclonal (DH01) anti-FZR1/CDH1 Thermo Fisher Scientific Cat# MA5-11496, RRID:AB_10979615
Rat monoclonal anti-Ki-67 (SolA15) Thermo Fisher Scientific Cat# 14-5698-82, RRID:AB_10854564
Purified Mouse anti-Aim1 / Aurora B (IF, IB) BD Biosciences Cat# 611082, RRID:AB_2227708
Rabbit monoclonal anti-Aurora B (IHC) Abcam Cat# ab287960, RRID: not found
Anti-H3S10ph (IF neurons) Millipore Cat# 06-570, RRID:AB_310177
Anti-H3S10ph (IHC) Cell Signaling Technology Cat# 9701, RRID: AB_331535
Rabbit polyclonal anti-H3S10ph (IF mitosis) Active Motif Cat# 39253, RRID:AB_2793206
Rabbit monoclonal anti-Survivin Cell Signaling Technology Cat# 71G4B7, RRID:AB_2063948
Rabbit monoclonal anti-Top2a Abcam Cat# ab52934, RRID:AB_883143
Rabbit anti-H3K9me3 Active Motif Cat# 39286, RRID: AB_2935892
Rabbit monoclonal anti-H3K27me3 Cell Signaling Technology Cat# 9733S, RRID:AB_2616029
Mouse anti-H4K20me3 Abcam Cat# ab78517, RRID:AB_1951279
Rabbit anti-Incenp (IB) Proteintech Cat# 29419-1-AP, RRID:AB_2918303
Mouse anti-INCENP Active Motif Cat# 39259, RRID:AB_2715518
Rabbit polyclonal anti-H3K27ac Active Motif Cat# 39034, RRID:AB_2722569
Rabbit anti-HP1a Cell Signaling Technology Cat# 2616S, RRID:AB_2070987
Rabbit anti-nucleolin Bethyl Cat# IHC-00083, RRID:AB_2267070
Goat anti-Mouse IgG (H+L) Highly Cross-Adsorbed Secondary, Alexa Fluor 568 Thermo Fisher Scientific Cat# A-11031, RRID:AB_144696
Goat anti-Rat IgG (H+L) Cross-Adsorbed Secondary, Alexa Fluor 488 Thermo Fisher Scientific Cat# A-11006, RRID:AB_2534074
Goat anti-Rat IgG (H+L) Cross-Adsorbed Secondary, Alexa Fluor 568 Thermo Fisher Scientific Cat# A-11007, RRID:AB_2896333
Donkey anti-Rabbit IgG (H+L) Highly Cross-Adsorbed Secondary, Alexa Fluor 488 Thermo Fisher Scientific Cat# A-21206, RRID:AB_2535792
Donkey Anti-Mouse IgG IRDye 680 Conjugated antibody LI-COR Biosciences Cat# 926-32222, RRID:AB_621844
IRDye 800CW Donkey anti-Rabbit IgG antibody LI-COR Biosciences Cat# 925-32213, RRID:AB_2715510
IRDye 800CW Goat anti-Rat IgG antibody LI-COR Biosciences Cat# 926-32219, RRID:AB_1850025
AffiniPure Rabbit Anti-Rat IgG (H+L) Jackson Immuno Research Cat# 312-005-045, RRID:AB_2339803
OmniMap DAB anti-Rb Ventana Medical systems Cat# 05266548001, RRID: Not Found
Chemicals, Peptides, and Recombinant Proteins
UBE1 (E1) (Jarvis et al., 201627) N/A
CDH1 protein (Jarvis et al., 201627) N/A
UBCH10 (E2) (Jarvis et al., 201627) N/A
UBE2S (E2) (Jarvis et al., 201627) N/A
Fluorescent cyclin B1-NTD (CycB-NTD) (Jarvis et al., 201627) N/A
ubiquitin (Jarvis et al., 201627) N/A
Ki-67 AA 1-300 (Ferguson et al., 20229) N/A
Benzonase Millipore E1014
Doxycycline Hyclate, 98% Thermo Scientific AC446060050
Hoechst 33258 solution Millipore Sigma Cat# 94403
TMT11 reagent Thermo Fisher Scientific A37727
TMT16 reagent Thermo Fisher Scientific A44520
TMTpro Thermo Fisher Scientific A44520
Pierce Trypsin Protease, MS Grade Thermo Fisher Scientific Cat#90305
Acetonitrile Honeywell AS017-0100
Lys-C, Mass Spectrometry Grade Wako Chemicals 129-02541
Palbociclib Selleck Chemical LLC 50-854-7
Pierce Phosphatase Inhibitor Mini Tablets (TMT/MS) Thermo Fisher Scientific A32957
Pierce Protease Inhibitor Mini Tablets (TMT/MS) Thermo Fisher Scientific A32953
Protease inhibitor cocktail Sigma P8340
Phosphatase inhibitor cocktail #3 Sigma P0044
PMSF Sigma PMSF-RO
Polybrene EMD Millipore TR-1003-G
Puromycin Thermo Fisher Scientific J67236.XF
PEG-it Virus Precipitation Solution System Biosciences LV810A-1
HyClone Fetal Bovine Serum Cytiva SH30071.03IH25-40
Pierce BCA Protein Assay Thermo Fisher Scientific Cat# 23223
Bradford regent Bio-Rad Cat# 5000006
Revert total protein stain LI-COR Cat# 926-11011
iScript cDNA synthesis kit Bio-Rad Cat# 1708890
Lenti-X TM Packaging Single Shots (VSV-G) Takara Bio Cat# 631275
Barasertib (AZD1152) MedChemExpress Cat# HY-10127
Hesperadin Cayman Chemical Cat# 24199
Deposited Data
Investigation of cerebellum-specific knockouts of Cdh1 and Apc7 This Study (Table S2) (http://www.ebi.ac.uk/pride) PXD038778
Phosphoproteomic analysis of Aurora B inhibition in WT and CDH1 mutant RPE1 cells This Study (Table S3) (http://www.ebi.ac.uk/pride) PXD044042
Investigating the effect of Aurora B inhibition in WT and Cdh1 mutant primary neuron cultures This Study (Table S4) (http://www.ebi.ac.uk/pride) PXD045116
Original/source data Mendeley Data DOI: 10.17632/5f5mhb8yzv.1
Experimental Models: cell lines
RPE-1 CEP192-mNeonGreen TetOn-Cas9 (Meitinger et al., 202072) ODCL0191
RPE-1 CEP192-mNeonGreen TetOn-Cas9 ANAPC7 gRNA #4 (Ferguson et al., 20229) N/A
RPE-1 CEP192-mNeonGreen TetOn-Cas9 FZR1 gRNA #1 This study N/A
RPE-1 CEP192-mNeonGreen TetOn-Cas9 FZR1 gRNA #2 This study N/A
RPE-1 CEP192-mNeonGreen TetOn-Cas9 FZR1 gRNA #3 This study N/A
RPE-1 CEP192-mNeonGreen TetOn-Cas9 FZR1 gRNA #4 This study N/A
Experimental Models: Organisms/Strains
Anapc7 mutant on hybrid C57BL/6 x 129 (Ferguson et al., 20229)
Anapc7 mutant on Jackson C57BL/6 (Ferguson et al., 20229) N/A
Cdc20f/f mice on C57BL/6 (Manchado et al., 201019) N/A
Fzr1/f mice on C57BL/6 (García-Higuera et al., 200818) N/A
Math1/Atoh1-cre mice on C57BL/6 The Jackson Laboratory Cat# 011104
Mki67 mutant on C57BL/6 (Sobecki et al., 201636) N/A
Wild-type Jackson C57BL/6 The Jackson Laboratory Cat# 000664
Oligonucleotides
See Table S1
Recombinant DNA/Cloning
pGEX-INCENP amino acids 256-632 This study N/A
pGEX-INCENP amino acids 256-563 This study N/A
pGEX-INCENP amino acids 256-563, Δ493-496, Δ539-542 This study N/A
NEB 5-alpha Competent E.Coli (High efficiency) New England Biolabs Cat# C2987H
Monarch Plasmid Miniprep kit New England Biolabs Cat# T1010S
BamHI- HF New England Biolabs Cat# R3136T
NotI-HF New England Biolabs Cat# R3189S
Esp3I Thermo Scientific Cat# FERER0451
Monarch PCR and DNA Cleanup Kit New England Biolabs Cat# T1030S
Monarch DNA Gel Extraction Kit New England Biolabs Cat# T1020S
Software and Algorithms
AlphaFold (Jumper et al., 202129) https://alphafold.ebi.ac.uk
ImageJ (Schneider et al., 201284) https://imagej.nih.gov/ij/
NIS - Elements Nikon RRID:SCR_014329
Image Studio LI-COR N/A
ImageLab Bio-rad N/A
CFX Maestro Bio-Rad N/A
SEQUEST-based in-house platform Thermo Fisher Scientific (Eng et al., 199478; Huttlin et al., 201079) http://fields.scripps.edu/yates/wp/?page_id=17
Other
Ventana Discovery Ultra Roche Diagnostics RRID: SCR_021254
Rneasy Mini Kit Qiagen Cat# 74104
Sep-Pak cartridge Waters WAT054925
Fe-NTA spin column Thermo Fisher A32992