TABLE 3.
Oligonucleotides and fluorescent probes used for real-time RT-PCR
| Gene | Primers and probe | Sequence (5′ to 3′) |
|---|---|---|
| BH0209 | Up RT-209 | CTCTTGAAAAACTTGACAAAAGTCTCA |
| Low RT-209 | CCATGATCTTGTTGCTGTCCTATG | |
| Probe BH0209 | AAACAGAAGTGAACACATTG | |
| BH0512 | Up RT-512 | TGGCAAAGGGAAGTAGGTT |
| Low RT-512 | ATGTCCTGAGAGTTCATTGAAAAT | |
| Probe BH0512 | TCACTAAGTTCTTTTCCCTTAGTCCTTTGAGTTT | |
| BH0553 | Up RT-553 | GGCAAAAAGATACTTCCAATAC |
| Low RT-553 | TTTGGGCTCTCCAAAAAG | |
| Probe BH0553 | AATGTGCACGAAAATAGCATAAGAATTCT | |
| flaB | Up-FlaB | CAGCTAGTGATGCTGGTGTGTTAAT |
| Low-FlaB | TTTGCGGGTTGCATTCCAAGCTCTT | |
| Probe FlaB | AAGTCAGCTGCTCAAAATGTAAAAAC | |
| vsp33 | Up-Vsp33 | AGAAGGGAAGTGATGATTTCTTAACC |
| Low-Vsp33 | GCATTACCTTTCTTTATAGCCTTTGG | |
| Probe Vsp33 | GCACTTTGACCAAGATTATTATGCTGCGCTTT |