Table 1.
Variant | Amino Acid Change | Annotation | Potential Interacting Human Protein | Human protein implicated with COVID-19 severity or susceptibility |
---|---|---|---|---|
A929G | ORF1ab I222V, nsp2 | Protein interacting* | GIGYF2, FKBP15*, WASHC4, RAP1GDS1, POR, eIF4E2*, SLC27A2 | GIGYF243 |
C22674T | Spike S371F | Protein interacting, antibody escape, vaccine target, Omicron-associated variant allele76 | GOLGA7, ZDHHC5 | GOLGA7, ZDHHC538 |
A25107G | Spike E1182G | Protein interacting, vaccine target | GOLGA7, ZDHHC5 | GOLGA7, ZDHHC538 |
G28237T | ORF8 R115L | Protein interacting* | COL6A1, PCSK6, LOX*, DNMT1*, NPC2, CISD3, ITGB1, PLAT, STC2, TOR1A, PLOD2*, INHBE, CHPF2, UGGT2, FBXL12, PLEKHF2, SMOC1, POFUT1, FKBP10*, ERLEC1, IL17RA, ADAMTS1, HS6ST2, SDF2, NEU1, GDF15, TM2D3, SIL1, EDEM3, ERP44, PVR, NGLY1, OS9, ADAM9, NPTX1, POGLUT2, POGLUT3, ERO1B, PLD3, FOXRED2, CHPF, PUSL1, HYOU1, MFGE8, FKBP7, GGH, EMC1 | COL6A179, LOX46, PLAT80, PLOD242, FBXL1281, FKBP1047, IL17RA82, HS6ST283, NEU184, GDF1585, ADAM986, PLD387 |
A * indicates a human protein that is druggable.