TABLE 4.
List of primers used in this study
| Name | Class | Sequencea | Reference or source |
|---|---|---|---|
| dsrA 14 | I | GACAGCATTCAGTGAATAATGGC | 19 |
| dsrA 19 | I | ATTAATGCAGCAGCCGCCAAAGTTTGCTGG | This study |
| dsrA 20 | I | GCGGCCGCGAATTCATACCCAACAGAACCACC | This study |
| dsrA 24 | I and II | AATGAAGTCCGCACCTTTAACGGC | 19 |
| dsrA 33 | II | CATCGTCGAACGCACACTG | This study |
| dsrA 36 | II | ATGCAGATGCAACCGCAAAATTTTG | This study |
| dsrA 37 | II | CGTGTTTTTAAAGATGTCAGC | This study |
| dsrA 38 | I | ATGCAGCAGCCGCCAAAGTTTGC | This study |
| dsrA 39 | I | TGTATTTTGTTCCATCATACG | This study |
| dsrA 42 | II | ctaggtctagaTGCCTTGCTCTTAATGACG | This study |
| dsrA 43 | II | gcccaagcttTAAAAGCACATAAACAAGCG | This study |
| ncaA 0.01 | I | GAATTATTTTAAGCCAATTTTTTTGC | This study |
| ncaA 0.02 | I | CCACATCCGAAACATATATTAAAGTTAATT | This study |
| ncaA 0.05 | I | TTATTGAAAATTATATACAAAGCCTACACC | This study |
| ncaA 0.08 | I | ATGAAATCAGATACGCTGAGTAAGG | This study |
| ncaA 0.09 | I | ATTTGCAGTAGTTGCTCCGCGTCC | This study |
| ncaA 0.10 | II | GGTTGATTATGTCGAATAATTTG | This study |
| ncaA 0.11 | II | CTAAGCGCGTAAAAATTCGATG | This study |
| DLTA.01 | I | CGCTTGTACAAGCGGGC | 33 |
| DLTA.02 | I | CAGCTTACAAAATGATGGGC | 33 |
| hgbA-F | II | AGCGATTACTCTCTGTATTTTGGGG | This study |
| hgbA-R | II | GCAGATATTGCTGCATCATCGGAG | This study |
| hgbA 2 | I | TTAATGCAGGGCCTGCGTTAAAGC | This study |
| hgbA 3 | I | TTAGCCGTACACACCCAAC | This study |
| hgbA 4 | I | CCTACTTTGCTACTCATTCTGCC | This study |
| hgbA 5 | I | CTAACCCTTCTGGGCTATAC | This study |
| hgbA 8 | I | CGCGCCTGTTTTAGTTTTAACTGG | This study |
| hgbA 9 | I | GCAGTGGTGGGCAAATATC | This study |
| hgbA 10 | I | GCTAGGTAAATACACACGGC | This study |
| hgbA 12 | I | CGTCCTTTGAGTTAAAGTGG | This study |
| hgbA 13 | I | TCAACCTCAAACGCATGTGGTTGGG | This study |
| hgbA 17 | I | GCATCCTTCGTTCTCGATTT | This study |
| hgbA 18 | I | GTACGGCTAACAAATCAAAA | This study |
| hgbA 21 | I | CATCCGTTCTATCCGCCCG | This study |
| 3fl2-3 | I | CCAATTATCTCCTATTGC | Fig. 2 in reference 31 |
| OmpA2-9 | I | GCGATAAATCACTCTTAACCCGAC | Fig. 2 in reference 31 |
a
Lowercase letters indicate a non-H. ducreyi sequence. Underlined sequences are XbaI and HindIII sites, respectively.