TABLE 5.
BLASTX results of most prevalent transcripts from f/50-specific SSH librarya
| SeqID | Putative ID | e value | Reads | Length |
|---|---|---|---|---|
| Sig1 | Unknown | >0.001 | 1 | 740 |
| Sig2 | Unknown | >0.001 | 1 | 1,108 |
| Sig3 | Subunit beta of ATPase (Ochrosphaera neapolitana) | 1.93E-44 | 1 | 612 |
| Sig4 | Unknown | >0.001 | 1 | 663 |
| Sig5 | Hypothetical protein (Plasmodium yoelii yoelii) | 1.4E-14 | 1 | 668 |
| Sig6 | Unknown | >0.001 | 1 | 781 |
| Sig7 | Unknown | >0.001 | 1 | 1,378 |
| Sig8 | Unknown | >0.001 | 1 | 537 |
| Sig9 | NADH dehydrogenase subunit 1 (Emiliania huxleyi) | 6.56E-40 | 1 | 746 |
| Sig10 | Unknown | >0.001 | 1 | 479 |
| Sig11 | Unknown | >0.001 | 1 | 604 |
| Sig12 | Unknown | >0.001 | 1 | 721 |
| Sig13 | Unknown | >0.001 | 1 | 407 |
| Sig14 | Unknown | >0.001 | 1 | 596 |
| Sig15 | Translation elongation factor Tu (Chromobacterium violaceum) | 1.51E-52 | 1 | 802 |
| Sig16 | Unknown | >0.001 | 1 | 790 |
| Sig17 | Unknown | >0.001 | 1 | 831 |
| Sig18 | Unknown | >0.001 | 1 | 849 |
| Uni1 | Unknown | >0.001 | 1 | 785 |
| Uni2 | Unknown | >0.001 | 1 | 893 |
| Uni4 | Unknown | >0.001 | 1 | 571 |
| Uni5 | Unknown | >0.001 | 1 | 661 |
| Uni6 | Unknown | >0.001 | 1 | 655 |
| Uni7 | 347L (Invertebrate iridescent virus 6) | 2.6E-07 | 1 | 559 |
| Con8 | Cytochrome c oxidase subunit 2 (Emiliania huxleyi) | 8.43E-31 | 2 | 587 |
| Con9 | Unknown | >0.001 | 2 | 242 |
| Con10 | Photosystem I P700 apoprotein A2 (Guillardia theta) | 5.21E-16 | 2 | 503 |
| Con11 | Unknown | >0.001 | 2 | 426 |
| Con12 | Unknown | >0.001 | 2 | 328 |
| Con13 | Unknown | >0.001 | 2 | 433 |
| Con14 | Unknown | >0.001 | 2 | 775 |
| Con15 | Unknown | >0.001 | 2 | 766 |
| Con17 | Unknown | >0.001 | 3 | 718 |
| Con18 | Unknown | >0.001 | 3 | 287 |
| Con19 | Unknown | >0.001 | 3 | 506 |
| Con20 | Unknown | >0.001 | 4 | 510 |
| Con21 | Unknown (Vibrio vulnificus CMCP6) | 1.9E-05 | 4 | 509 |
| Con22 | Unknown | >0.001 | 4 | 358 |
| Con23 | Unknown | >0.001 | 4 | 528 |
| Con24 | Unknown | >0.001 | 5 | 170 |
| Con25 | Unknown | >0.001 | 5 | 348 |
| Con26 | Unknown | >0.001 | 8 | 640 |
| Con27 | Ribosomal protein S3 (Porphyra purpurea) | 6.32E-17 | 8 | 636 |
| Con28 | Unknown | >0.001 | 8 | 596 |
| Con29 | Unknown | >0.001 | 16 | 787 |
| Con30 | Photosystem II reaction center protein D1 (Emiliania huxleyi) | 5.39E-37 | 18 | 841 |
| Con31 | 347L (Invertebrate iridescent virus 6) | 4.15E-06 | 18 | 1,279 |
| Con32 | Unknown | >0.001 | 18 | 422 |
| Con33 | Hypothetical protein (Nostoc punctiforme) | 8.19E-06 | 19 | 1,170 |
| Con35 | Putative senescence-associated protein (Pisum sativum) | 9.65E-23 | 25 | 1,014 |
| Con36 | Unknown | >0.001 | 29 | 1,980 |
| Con37 | Unknown | >0.001 | 42 | 968 |
| Con38 | Hypothetical protein | 0.00022 | 105 | 2,391 |
a
BLASTX results following PHRAP assembly are listed as follows: SeqID (sequence identification number) for singletons (Sig) and contigs (Con), Reads (numbers of EST fragments per assembled sequence), and Length (average sequence length in base pairs).