TABLE 3.
Optimized primer and probe concentrations for the duplex 5′ nuclease assays
Target | 5′ Nuclease assay | Concn (nM) of:
|
||
---|---|---|---|---|
Forward primer | Reverse primer | Probe | ||
B. adolescentis | B. adolescentis | 300 | 150 | 100 |
All bifidobacteria | 300 | 600 | 100 | |
B. angulatum | B. angulatum | 900 | 900 | 200 |
All bifidobacteria | 300 | 300 | 50 | |
B. bifidum | B. bifidum | 600 | 600 | 200 |
All bifidobacteria | 300 | 300 | 100 | |
B. breve | B. breve | 300 | 300 | 100 |
All bifidobacteria | 450 | 450 | 150 | |
B. catenulatum | B. catenulatum | 300 | 300 | 100 |
All bifidobacteria | 600 | 600 | 100 | |
B. dentium | B. dentium | 900 | 900 | 200 |
All bifidobacteria | 300 | 300 | 50 | |
B. infantis | B. infantis | 300 | 300 | 100 |
All bifidobacteria | 900 | 900 | 100 | |
B. longum | B. longum | 300 | 300 | 100 |
All bifidobacteria | 600 | 600 | 200 | |
All bifidobacteria | All bifidobacteria | 450 | 450 | 100 |
All bacteria | 900 | 900 | 200 |